STRINGSTRING
LOC100691708 LOC100691708 hspa9 hspa9 LOC102081429 LOC102081429 LOC100700059 LOC100700059 tnfaip6 tnfaip6 gabpa gabpa cib1 cib1 Nf1 Nf1 LOC100710258 LOC100710258 LOC100698978 LOC100698978 CLDN18 CLDN18 nfkbia nfkbia tmem178a tmem178a inpp5d inpp5d cdc73 cdc73 fstl3 fstl3 LOC109204112 LOC109204112 ctr9 ctr9 meis2 meis2 ENSONIP00000068914 ENSONIP00000068914 LOC100701834 LOC100701834 meis1 meis1 LOC100690952 LOC100690952
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC100691708Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a. (305 aa)
hspa9Heat shock protein 9; Belongs to the heat shock protein 70 family. (678 aa)
LOC102081429TNF receptor superfamily member 11b. (417 aa)
LOC100700059Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family. (244 aa)
tnfaip6Tumor necrosis factor, alpha-induced protein 6. (252 aa)
gabpaGA binding protein transcription factor subunit alpha. (447 aa)
cib1Calcium and integrin binding 1 (calmyrin). (189 aa)
Nf1Neurofibromin 1b. (2742 aa)
LOC100710258Leucine rich repeat containing 17. (452 aa)
LOC100698978G protein-coupled receptor 137Bb. (395 aa)
CLDN18Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family. (255 aa)
nfkbiaNuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b. (318 aa)
tmem178aTransmembrane protein 178. (330 aa)
inpp5dInositol polyphosphate-5-phosphatase D. (1133 aa)
cdc73Ro60, Y RNA binding protein. (530 aa)
fstl3Follistatin-like 3 (secreted glycoprotein). (278 aa)
LOC109204112Serum amyloid P-component-like isoform X1. (265 aa)
ctr9CTR9 homolog, Paf1/RNA polymerase II complex component. (1174 aa)
meis2Meis homeobox 2a. (480 aa)
ENSONIP00000068914Serum amyloid P-component isoform X1. (265 aa)
LOC100701834G protein-coupled receptor 171. (385 aa)
meis1Meis homeobox 1 b. (387 aa)
LOC100690952Meis homeobox 2b. (431 aa)
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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