11 items (Oreochromis niloticus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	atp5f1d	ATP synthase F1 subunit delta. (192 aa)
	LOC100710668	Uncharacterized protein. (618 aa)
	atp5mf	ATP synthase membrane subunit f. (113 aa)
	atp5po	ATP synthase peripheral stalk subunit OSCP. (209 aa)
	atp5f1e	ATP synthase F1 subunit epsilon. (72 aa)
	atp5f1a	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. (578 aa)
	LOC100709974	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. (570 aa)
	LOC100693141	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. (550 aa)
	atp5f1c	ATP synthase subunit gamma. (294 aa)
	LOC100696915	Uncharacterized protein. (521 aa)
	atp6v1a	ATPase H+ transporting V1 subunit A. (618 aa)

Your Current Organism:

Oreochromis niloticus

NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC100693141	LOC100696915	ENSONIP00000052845	ENSONIP00000074866	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Uncharacterized protein.	0.954
LOC100693141	LOC100709974	ENSONIP00000052845	ENSONIP00000052384	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.998
LOC100693141	LOC100710668	ENSONIP00000052845	ENSONIP00000006476	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Uncharacterized protein.	0.664
LOC100693141	atp5f1a	ENSONIP00000052845	ENSONIP00000044896	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.998
LOC100693141	atp5f1c	ENSONIP00000052845	ENSONIP00000061772	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit gamma.	0.999
LOC100693141	atp5f1d	ENSONIP00000052845	ENSONIP00000003039	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase F1 subunit delta.	0.999
LOC100693141	atp5f1e	ENSONIP00000052845	ENSONIP00000038117	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase F1 subunit epsilon.	0.989
LOC100693141	atp5mf	ENSONIP00000052845	ENSONIP00000010681	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase membrane subunit f.	0.977
LOC100693141	atp5po	ENSONIP00000052845	ENSONIP00000016285	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase peripheral stalk subunit OSCP.	0.999
LOC100693141	atp6v1a	ENSONIP00000052845	ENSONIP00000078635	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATPase H+ transporting V1 subunit A.	0.664
LOC100696915	LOC100693141	ENSONIP00000074866	ENSONIP00000052845	Uncharacterized protein.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.954
LOC100696915	LOC100709974	ENSONIP00000074866	ENSONIP00000052384	Uncharacterized protein.	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.940
LOC100696915	atp5f1a	ENSONIP00000074866	ENSONIP00000044896	Uncharacterized protein.	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.940
LOC100696915	atp5f1c	ENSONIP00000074866	ENSONIP00000061772	Uncharacterized protein.	ATP synthase subunit gamma.	0.964
LOC100696915	atp5f1d	ENSONIP00000074866	ENSONIP00000003039	Uncharacterized protein.	ATP synthase F1 subunit delta.	0.977
LOC100696915	atp5f1e	ENSONIP00000074866	ENSONIP00000038117	Uncharacterized protein.	ATP synthase F1 subunit epsilon.	0.978
LOC100696915	atp5po	ENSONIP00000074866	ENSONIP00000016285	Uncharacterized protein.	ATP synthase peripheral stalk subunit OSCP.	0.989
LOC100709974	LOC100693141	ENSONIP00000052384	ENSONIP00000052845	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.998
LOC100709974	LOC100696915	ENSONIP00000052384	ENSONIP00000074866	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Uncharacterized protein.	0.940
LOC100709974	LOC100710668	ENSONIP00000052384	ENSONIP00000006476	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Uncharacterized protein.	0.766