STRINGSTRING
Vegfd Vegfd LOC100701740 LOC100701740 Vegfb Vegfb LOC100707172 LOC100707172 Lrrc1 Lrrc1 LOC100700684 LOC100700684 fgf7 fgf7 I3KBE6_ORENI I3KBE6_ORENI LOC100706816 LOC100706816 vegfc vegfc I3KWA4_ORENI I3KWA4_ORENI mst1r mst1r LOC100697209 LOC100697209 LOC100695462 LOC100695462 I3JG86_ORENI I3JG86_ORENI ntf3 ntf3 alkbh1 alkbh1 LOC100712331 LOC100712331 LOC100697584 LOC100697584 tsc2 tsc2 met met
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VegfdVascular endothelial growth factor D; Belongs to the PDGF/VEGF growth factor family. (315 aa)
LOC100701740Macrophage stimulating 1 receptor a. (1371 aa)
VegfbPDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family. (274 aa)
LOC100707172Platelet-derived growth factor beta polypeptide b; Belongs to the PDGF/VEGF growth factor family. (612 aa)
Lrrc1Leucine rich repeat containing 1. (590 aa)
LOC100700684Galectin. (229 aa)
fgf7Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (200 aa)
I3KBE6_ORENIUncharacterized protein. (612 aa)
LOC100706816Galectin-3 isoform X2. (376 aa)
vegfcVascular endothelial growth factor c; Belongs to the PDGF/VEGF growth factor family. (418 aa)
I3KWA4_ORENIPDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family. (185 aa)
mst1rMacrophage stimulating 1 receptor b. (1374 aa)
LOC100697209Secretogranin II (chromogranin C), b. (583 aa)
LOC100695462PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family. (145 aa)
I3JG86_ORENIScribble planar cell polarity protein. (1749 aa)
ntf3Neurotrophin-3; Seems to promote the survival of visceral and proprioceptive sensory neurons; Belongs to the NGF-beta family. (293 aa)
alkbh1AlkB homolog 1, histone H2A dioxygenase. (342 aa)
LOC100712331Platelet-derived growth factor beta polypeptide a; Belongs to the PDGF/VEGF growth factor family. (545 aa)
LOC100697584Galectin. (366 aa)
tsc2Rap-GAP domain-containing protein. (1899 aa)
metMET proto-oncogene, receptor tyrosine kinase. (1423 aa)
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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