STRINGSTRING
I3KWA4_ORENI I3KWA4_ORENI LOC100697209 LOC100697209 LOC100695280 LOC100695280 ntf3 ntf3 LOC100709445 LOC100709445 Vegfd Vegfd Vegfb Vegfb LOC102075588 LOC102075588 I3KBE6_ORENI I3KBE6_ORENI il16 il16 vegfc vegfc
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
I3KWA4_ORENIPDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family. (185 aa)
LOC100697209Secretogranin II (chromogranin C), b. (583 aa)
LOC100695280Chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1); Belongs to the intercrine alpha (chemokine CxC) family. (90 aa)
ntf3Neurotrophin-3; Seems to promote the survival of visceral and proprioceptive sensory neurons; Belongs to the NGF-beta family. (293 aa)
LOC100709445Chemokine (C-X-C motif) ligand 12b (stromal cell-derived factor 1); Belongs to the intercrine alpha (chemokine CxC) family. (102 aa)
VegfdVascular endothelial growth factor D; Belongs to the PDGF/VEGF growth factor family. (315 aa)
VegfbPDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family. (274 aa)
LOC102075588TGF_BETA_2 domain-containing protein. (299 aa)
I3KBE6_ORENIUncharacterized protein. (612 aa)
il16Uncharacterized protein. (623 aa)
vegfcVascular endothelial growth factor c; Belongs to the PDGF/VEGF growth factor family. (418 aa)
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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