STRINGSTRING
I3KPE5_ORENI I3KPE5_ORENI xrcc5 xrcc5 fev fev batf batf mib1 mib1 ENSONIP00000035341 ENSONIP00000035341 LOC109194259 LOC109194259 sh2b3 sh2b3 pdgfrb pdgfrb ufl1 ufl1 notch1 notch1 I3JWF9_ORENI I3JWF9_ORENI SRF SRF ercc2 ercc2 LOC100703553 LOC100703553
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
I3KPE5_ORENIMesenchyme homeobox 1. (241 aa)
xrcc5X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family. (746 aa)
fevFEV transcription factor, ETS family member. (220 aa)
batfBasic leucine zipper transcription factor, ATF-like. (123 aa)
mib1Mindbomb E3 ubiquitin protein ligase 1. (1040 aa)
ENSONIP00000035341T-cell acute lymphocytic leukemia protein 1 homolog. (100 aa)
LOC109194259T-cell acute lymphocytic leukemia 1. (447 aa)
sh2b3SH2B adaptor protein 3. (723 aa)
pdgfrbPlatelet-derived growth factor receptor beta; Tyrosine-protein kinase that acts as cell-surface receptor for homodimeric PDGFB and PDGFD and for heterodimers formed by PDGFA and PDGFB, and plays an essential role in the regulation of embryonic development, cell proliferation, survival, differentiation, chemotaxis and migration. Plays an essential role in blood vessel development by promoting proliferation, migration and recruitment of pericytes and smooth muscle cells to endothelial cells. (1104 aa)
ufl1UFM1-specific ligase 1. (796 aa)
notch1Notch receptor 1b. (2519 aa)
I3JWF9_ORENIMADS-box domain-containing protein. (506 aa)
SRFSerum response factor. (597 aa)
ercc2Excision repair cross-complementation group 2. (760 aa)
LOC100703553Notch receptor 1a. (2480 aa)
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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