STRINGSTRING
ube2k ube2k Lsm14a Lsm14a rnf185 rnf185 Fadd Fadd tbk1 tbk1 LOC100708886 LOC100708886 I3KPD0_ORENI I3KPD0_ORENI LOC100702954 LOC100702954 ikbke ikbke mavs mavs
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ube2kUbiquitin-conjugating enzyme E2Kb (UBC1 homolog, yeast); Belongs to the ubiquitin-conjugating enzyme family. (200 aa)
Lsm14aLSM14A mRNA processing body assembly factor. (106 aa)
rnf185Ring finger protein 185. (172 aa)
FaddUncharacterized protein. (209 aa)
tbk1TANK-binding kinase 1. (746 aa)
LOC100708886Ubiquitin conjugating enzyme E2 K; Belongs to the ubiquitin-conjugating enzyme family. (200 aa)
I3KPD0_ORENILSM14A mRNA processing body assembly factor a. (99 aa)
LOC100702954Interferon regulatory factor 3. (466 aa)
ikbkeInhibitor of nuclear factor kappa B kinase subunit epsilon. (721 aa)
mavsCARD_2 domain-containing protein. (552 aa)
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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