STRINGSTRING
LOC100691722 LOC100691722 LOC100693961 LOC100693961 I3JMR8_ORENI I3JMR8_ORENI smarca4 smarca4 I3KNN9_ORENI I3KNN9_ORENI I3KRB5_ORENI I3KRB5_ORENI smarcc2 smarcc2 smarce1 smarce1 LOC100698130 LOC100698130 smarcd1 smarcd1 LOC100696262 LOC100696262 smarcc1 smarcc1 LOC100696470 LOC100696470 LOC100704669 LOC100704669 I3JG14_ORENI I3JG14_ORENI LOC100699288 LOC100699288 phf10 phf10
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC100691722SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1. (474 aa)
LOC100693961SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1b. (947 aa)
I3JMR8_ORENIARID domain-containing protein. (1813 aa)
smarca4SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4a. (1628 aa)
I3KNN9_ORENIUncharacterized protein. (1608 aa)
I3KRB5_ORENIAT rich interactive domain 1B (SWI1-like). (1954 aa)
smarcc2SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2. (1084 aa)
smarce1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1. (506 aa)
LOC100698130AT rich interactive domain 1Ab (SWI-like). (2303 aa)
smarcd1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1. (514 aa)
LOC100696262SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family. (402 aa)
smarcc1Uncharacterized protein. (1138 aa)
LOC100696470AT rich interactive domain 1Aa (SWI-like). (2307 aa)
LOC100704669SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family. (368 aa)
I3JG14_ORENISWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3b. (491 aa)
LOC100699288SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2. (1626 aa)
phf10PHD finger protein 10. (516 aa)
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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