STRINGSTRING
LOC100699288 LOC100699288 I3JG14_ORENI I3JG14_ORENI LOC100693961 LOC100693961 LOC100691722 LOC100691722 I3JMR8_ORENI I3JMR8_ORENI smarca4 smarca4 dpf1 dpf1 I3KNN9_ORENI I3KNN9_ORENI I3KRB5_ORENI I3KRB5_ORENI smarcc2 smarcc2 smarce1 smarce1 LOC100698130 LOC100698130 LOC100693327 LOC100693327 smarcd1 smarcd1 LOC100696262 LOC100696262 LOC100700092 LOC100700092 LOC100692623 LOC100692623 smarcc1 smarcc1 LOC100696470 LOC100696470 LOC100704669 LOC100704669
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC100699288SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2. (1626 aa)
I3JG14_ORENISWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3b. (491 aa)
LOC100693961SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1b. (947 aa)
LOC100691722SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1. (474 aa)
I3JMR8_ORENIARID domain-containing protein. (1813 aa)
smarca4SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4a. (1628 aa)
dpf1D4, zinc and double PHD fingers family 1. (391 aa)
I3KNN9_ORENIUncharacterized protein. (1608 aa)
I3KRB5_ORENIAT rich interactive domain 1B (SWI1-like). (1954 aa)
smarcc2SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2. (1084 aa)
smarce1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1. (506 aa)
LOC100698130AT rich interactive domain 1Ab (SWI-like). (2303 aa)
LOC100693327D4, zinc and double PHD fingers, family 3. (398 aa)
smarcd1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1. (514 aa)
LOC100696262SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family. (402 aa)
LOC100700092Uncharacterized protein. (406 aa)
LOC100692623D4, zinc and double PHD fingers family 2. (426 aa)
smarcc1Uncharacterized protein. (1138 aa)
LOC100696470AT rich interactive domain 1Aa (SWI-like). (2307 aa)
LOC100704669SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family. (368 aa)
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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