STRINGSTRING
LOC100701722 LOC100701722 LOC100709775 LOC100709775 hlx hlx LOC100697163 LOC100697163 rc3h1 rc3h1 vsir vsir LOC100703809 LOC100703809 LOC100702318 LOC100702318 LOC100702646 LOC100702646 Tbx21 Tbx21 cbfb cbfb LOC100694718 LOC100694718
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC100701722Uncharacterized protein. (507 aa)
LOC100709775Ring finger and CCCH-type domains 2. (1152 aa)
hlxH2.0-like homeo box 1 (Drosophila). (379 aa)
LOC100697163E3 ubiquitin-protein ligase. (888 aa)
rc3h1Ring finger and CCCH-type domains 1b. (1105 aa)
vsirV-set immunoregulatory receptor. (302 aa)
LOC100703809Si:dkey-206d17.12. (643 aa)
LOC100702318Galectin. (324 aa)
LOC100702646Zinc finger CCCH-type containing 12A. (632 aa)
Tbx21T-box transcription factor 21. (605 aa)
cbfbCore-binding factor subunit beta. (188 aa)
LOC100694718E3 ubiquitin-protein ligase. (877 aa)
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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