STRINGSTRING
fbh1 fbh1 ENSONIP00000071328 ENSONIP00000071328 LOC102077348 LOC102077348 ENSONIP00000054328 ENSONIP00000054328 fancb fancb smchd1 smchd1 otub1 otub1 rif1 rif1 OTUB2 OTUB2 recql5 recql5 parpbp parpbp Ogg1 Ogg1 ubr5 ubr5 ercc6 ercc6 tp53bp1 tp53bp1 rmi2 rmi2 Hmga2 Hmga2 radx radx trip12 trip12
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
fbh1F-box DNA helicase 1. (1077 aa)
ENSONIP00000071328annotation not available (195 aa)
LOC102077348RPA-related protein RADX isoform X1. (862 aa)
ENSONIP00000054328annotation not available (222 aa)
fancbFA complementation group B. (767 aa)
smchd1Structural maintenance of chromosomes flexible hinge domain containing 1. (1985 aa)
otub1Ubiquitin thioesterase. (279 aa)
rif1Replication timing regulatory factor 1. (2388 aa)
OTUB2OTU deubiquitinase, ubiquitin aldehyde binding 2. (227 aa)
recql5RecQ helicase-like 5. (1019 aa)
parpbpPARP1 binding protein. (610 aa)
Ogg18-oxoguanine DNA glycosylase. (416 aa)
ubr5Ubiquitin protein ligase E3 component n-recognin 5. (2785 aa)
ercc6Excision repair cross-complementation group 6. (1437 aa)
tp53bp1Tumor protein p53 binding protein, 1. (1499 aa)
rmi2RecQ mediated genome instability 2. (146 aa)
Hmga2Uncharacterized protein. (132 aa)
radxRPA1 related single stranded DNA binding protein. (846 aa)
trip12Thyroid hormone receptor interactor 12. (2065 aa)
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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