STRINGSTRING
rpl27 rpl27 I3JVB1_ORENI I3JVB1_ORENI LOC100709849 LOC100709849 ckap4 ckap4 Lrpap1 Lrpap1 LOC100703809 LOC100703809 LOC100712094 LOC100712094 LOC100702646 LOC100702646 LOC100705822 LOC100705822 sec61a1 sec61a1 tmem97 tmem97 epm2a epm2a LOC100705764 LOC100705764 sec62 sec62 RPS29 RPS29 LOC100692912 LOC100692912 ENSONIP00000062777 ENSONIP00000062777 LOC109198956 LOC109198956 rps15a rps15a myh9 myh9 Sec61b Sec61b ptgdsl1 ptgdsl1 ENSONIP00000054234 ENSONIP00000054234 arl6ip1 arl6ip1 I3J3Q0_ORENI I3J3Q0_ORENI ENSONIP00000035818 ENSONIP00000035818 ccdc47 ccdc47 LOC100693460 LOC100693460 rpl4 rpl4 I3JC84_ORENI I3JC84_ORENI srpra srpra rangrf rangrf fkrp fkrp rps26 rps26 LOC100696698 LOC100696698 hcrt hcrt LOC100703696 LOC100703696 myoc myoc LOC100694684 LOC100694684 LOC100690391 LOC100690391 rpl18 rpl18 ENSONIP00000009377 ENSONIP00000009377 LOC100692341 LOC100692341 maco1 maco1 ptgdsl2 ptgdsl2 sec63 sec63 srprb srprb rps21 rps21 ssr4 ssr4 ENSONIP00000032299 ENSONIP00000032299 ENSONIP00000041950 ENSONIP00000041950
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rpl2760S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (136 aa)
I3JVB1_ORENILecithin retinol acyltransferase a. (228 aa)
LOC100709849Olfactomedin-like domain-containing protein. (403 aa)
ckap4Uncharacterized protein. (444 aa)
Lrpap1Low density lipoprotein receptor-related protein associated protein 1. (348 aa)
LOC100703809Si:dkey-206d17.12. (643 aa)
LOC100712094Prostaglandin D2 synthase b, tandem duplicate 1; Belongs to the calycin superfamily. Lipocalin family. (183 aa)
LOC100702646Zinc finger CCCH-type containing 12A. (632 aa)
LOC100705822Olfactomedin-like 3a. (402 aa)
sec61a1Plug_translocon domain-containing protein. (476 aa)
tmem97Transmembrane protein 97; Intracellular orphan receptor that binds numerous drugs and which is highly expressed in various proliferating cells. Corresponds to the sigma-2 receptor, which is thought to play important role in regulating cell survival, morphology and differentiation. May play a role as a regulator of cellular cholesterol homeostasis. May function as sterol isomerase. May alter the activity of some cytochrome P450 proteins. (233 aa)
epm2aEPM2A glucan phosphatase, laforin. (316 aa)
LOC100705764Myosin, heavy chain 9a, non-muscle; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1985 aa)
sec62SEC62 homolog, preprotein translocation factor. (402 aa)
RPS29Ribosomal protein S29. (60 aa)
LOC100692912Olfactomedin-like domain-containing protein. (461 aa)
ENSONIP00000062777annotation not available (143 aa)
LOC109198956Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family. (184 aa)
rps15aRibosomal protein S15a; Belongs to the universal ribosomal protein uS8 family. (160 aa)
myh9Myosin heavy chain 9; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1971 aa)
Sec61bProtein transport protein SEC61 subunit beta. (97 aa)
ptgdsl1Putative prostaglandin D synthase; Belongs to the calycin superfamily. Lipocalin family. (215 aa)
ENSONIP00000054234Lipocalin 15. (185 aa)
arl6ip1ADP-ribosylation factor-like 6 interacting protein 1. (203 aa)
I3J3Q0_ORENISUN domain containing ossification factor. (1129 aa)
ENSONIP00000035818annotation not available (135 aa)
ccdc47Coiled-coil domain containing 47. (528 aa)
LOC100693460SUN domain-containing protein. (1309 aa)
rpl4Ribosomal protein L4. (383 aa)
I3JC84_ORENILipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family. (204 aa)
srpraSRP receptor subunit alpha. (647 aa)
rangrfRAN guanine nucleotide release factor. (185 aa)
fkrpFukutin related protein. (529 aa)
rps2640S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (149 aa)
LOC100696698Plug_translocon domain-containing protein. (487 aa)
hcrtHypocretin (orexin) neuropeptide precursor. (140 aa)
LOC100703696Phosphoinositide phospholipase C. (1214 aa)
myocMyocilin. (482 aa)
LOC100694684Si:dkey-12h9.6. (654 aa)
LOC100690391Myosin, heavy chain 14, non-muscle; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2060 aa)
rpl1860S ribosomal protein L18; Component of the large ribosomal subunit. (188 aa)
ENSONIP00000009377annotation not available (151 aa)
LOC100692341Macoilin 1a. (676 aa)
maco1Macoilin 1b. (681 aa)
ptgdsl2Putative prostaglandin D synthase; Belongs to the calycin superfamily. Lipocalin family. (185 aa)
sec63SEC63 homolog, protein translocation regulator. (761 aa)
srprbSRP receptor subunit beta. (336 aa)
rps2140S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (94 aa)
ssr4Signal sequence receptor, delta. (196 aa)
ENSONIP00000032299annotation not available (85 aa)
ENSONIP00000041950Ribosomal protein S28. (63 aa)
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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