STRINGSTRING
LOC100705183 LOC100705183 mpnd mpnd I3JG14_ORENI I3JG14_ORENI smarcd1 smarcd1 smarce1 smarce1 I3KRJ8_ORENI I3KRJ8_ORENI smarcd2 smarcd2 I3KDT0_ORENI I3KDT0_ORENI arid2 arid2 BCL11B BCL11B LOC100691722 LOC100691722 bicra bicra brd9 brd9 actl6a actl6a LOC100703242 LOC100703242 LOC102081615 LOC102081615
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC100705183Zinc finger protein 296. (810 aa)
mpndMPN domain containing. (494 aa)
I3JG14_ORENISWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3b. (491 aa)
smarcd1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1. (514 aa)
smarce1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1. (506 aa)
I3KRJ8_ORENIBAF chromatin remodeling complex subunit BCL11A b. (784 aa)
smarcd2SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2. (501 aa)
I3KDT0_ORENIBAF chromatin remodeling complex subunit BCL7A. (168 aa)
arid2AT rich interactive domain 2 (ARID, RFX-like). (1688 aa)
BCL11BBAF chromatin remodeling complex subunit BCL11B. (847 aa)
LOC100691722SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1. (474 aa)
bicraBRD4 interacting chromatin remodeling complex associated protein. (1859 aa)
brd9Bromodomain containing 9. (671 aa)
actl6aActin-like 6A; Belongs to the actin family. (432 aa)
LOC100703242Im:7142702. (837 aa)
LOC102081615Si:ch211-168d23.3. (1281 aa)
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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