19 items (Oreochromis niloticus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RPL19	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (194 aa)
	rpl30	Ribosomal protein L30. (116 aa)
	rplp1	Ribosomal protein, large, P1; Belongs to the eukaryotic ribosomal protein P1/P2 family. (114 aa)
	rpl18	60S ribosomal protein L18; Component of the large ribosomal subunit. (188 aa)
	rpl9	Ribosomal protein L9. (192 aa)
	rpl15	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (204 aa)
	rpl6	Ribosomal protein L6. (325 aa)
	RPL19-2	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (197 aa)
	LOC100708525	Ribosomal protein L26. (145 aa)
	ENSONIP00000029827	annotation not available (173 aa)
	rpl10	Ribosomal protein L10. (285 aa)
	rpl29	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (64 aa)
	rpl18a	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. (212 aa)
	rpl4	Ribosomal protein L4. (383 aa)
	rpl31	Ribosomal protein L31. (213 aa)
	Rpl35a	Large subunit ribosomal protein L35Ae. (110 aa)
	zcchc17	Zinc finger, CCHC domain containing 17. (246 aa)
	rpl32	Ribosomal protein L32. (150 aa)
	ENSONIP00000079022	60S ribosomal protein L27a-like isoform X3. (30 aa)

Your Current Organism:

Oreochromis niloticus

NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSONIP00000029827	ENSONIP00000079022	ENSONIP00000029827	ENSONIP00000079022	annotation not available	60S ribosomal protein L27a-like isoform X3.	0.977
ENSONIP00000029827	LOC100708525	ENSONIP00000029827	ENSONIP00000022288	annotation not available	Ribosomal protein L26.	0.988
ENSONIP00000029827	RPL19	ENSONIP00000029827	ENSONIP00000001138	annotation not available	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	0.962
ENSONIP00000029827	RPL19-2	ENSONIP00000029827	ENSONIP00000020477	annotation not available	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	0.962
ENSONIP00000029827	Rpl35a	ENSONIP00000029827	ENSONIP00000054848	annotation not available	Large subunit ribosomal protein L35Ae.	0.991
ENSONIP00000029827	rpl15	ENSONIP00000029827	ENSONIP00000012959	annotation not available	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	0.982
ENSONIP00000029827	rpl18	ENSONIP00000029827	ENSONIP00000008247	annotation not available	60S ribosomal protein L18; Component of the large ribosomal subunit.	0.985
ENSONIP00000029827	rpl18a	ENSONIP00000029827	ENSONIP00000042922	annotation not available	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.	0.987
ENSONIP00000029827	rpl29	ENSONIP00000029827	ENSONIP00000038136	annotation not available	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.	0.990
ENSONIP00000029827	rpl30	ENSONIP00000029827	ENSONIP00000003346	annotation not available	Ribosomal protein L30.	0.993
ENSONIP00000029827	rpl31	ENSONIP00000029827	ENSONIP00000054630	annotation not available	Ribosomal protein L31.	0.990
ENSONIP00000029827	rpl32	ENSONIP00000029827	ENSONIP00000063622	annotation not available	Ribosomal protein L32.	0.991
ENSONIP00000029827	rpl4	ENSONIP00000029827	ENSONIP00000047821	annotation not available	Ribosomal protein L4.	0.988
ENSONIP00000029827	rpl6	ENSONIP00000029827	ENSONIP00000018087	annotation not available	Ribosomal protein L6.	0.990
ENSONIP00000029827	rpl9	ENSONIP00000029827	ENSONIP00000011307	annotation not available	Ribosomal protein L9.	0.993
ENSONIP00000029827	rplp1	ENSONIP00000029827	ENSONIP00000003528	annotation not available	Ribosomal protein, large, P1; Belongs to the eukaryotic ribosomal protein P1/P2 family.	0.993
ENSONIP00000079022	ENSONIP00000029827	ENSONIP00000079022	ENSONIP00000029827	60S ribosomal protein L27a-like isoform X3.	annotation not available	0.977
ENSONIP00000079022	LOC100708525	ENSONIP00000079022	ENSONIP00000022288	60S ribosomal protein L27a-like isoform X3.	Ribosomal protein L26.	0.992
ENSONIP00000079022	RPL19	ENSONIP00000079022	ENSONIP00000001138	60S ribosomal protein L27a-like isoform X3.	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	0.978
ENSONIP00000079022	RPL19-2	ENSONIP00000079022	ENSONIP00000020477	60S ribosomal protein L27a-like isoform X3.	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	0.978