STRINGSTRING
rpl29 rpl29 rps16 rps16 ENSONIP00000041950 ENSONIP00000041950 rpl18a rpl18a rps5 rps5 rpl4 rpl4 rps15 rps15 rpl31 rpl31 Rps7 Rps7 rps23 rps23 RPS29 RPS29 rps6 rps6 ENSONIP00000079022 ENSONIP00000079022 ENSONIP00000076314 ENSONIP00000076314 ENSONIP00000074793 ENSONIP00000074793 rps24 rps24 ENSONIP00000072598 ENSONIP00000072598 RPL27A RPL27A rps13 rps13 rpl32 rpl32 rpl35 rpl35 rps18 rps18 rps20 rps20 ENSONIP00000060841 ENSONIP00000060841 RPL7A RPL7A zcchc17 zcchc17 Rpl35a Rpl35a fau fau RPL19 RPL19 rps2 rps2 mcts1 mcts1 rpl30 rpl30 rplp1 rplp1 rps25 rps25 rpl13 rpl13 LOC100701341 LOC100701341 LOC100701613 LOC100701613 LOC100691161 LOC100691161 LOC100691432 LOC100691432 rpl18 rpl18 rpl28 rpl28 dhx29 dhx29 rpl9 rpl9 rps3a rps3a rpl15 rpl15 rpl21 rpl21 rpl6 rpl6 LOC100689943 LOC100689943 RPL19-2 RPL19-2 LOC100708525 LOC100708525 LOC100698589 LOC100698589 rps26 rps26 RPS19 RPS19 I3J2M6_ORENI I3J2M6_ORENI ENSONIP00000029827 ENSONIP00000029827 rpl36 rpl36 LOC100707344 LOC100707344 ENSONIP00000031770 ENSONIP00000031770 RPS17 RPS17 ENSONIP00000032299 ENSONIP00000032299 rpl10 rpl10 rpl24 rpl24 Rpl34 Rpl34
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rpl2960S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (64 aa)
rps16Ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (164 aa)
ENSONIP00000041950Ribosomal protein S28. (63 aa)
rpl18a60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. (212 aa)
rps5Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (224 aa)
rpl4Ribosomal protein L4. (383 aa)
rps15Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (170 aa)
rpl31Ribosomal protein L31. (213 aa)
Rps740S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (207 aa)
rps23Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (161 aa)
RPS29Ribosomal protein S29. (60 aa)
rps640S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (249 aa)
ENSONIP0000007902260S ribosomal protein L27a-like isoform X3. (30 aa)
ENSONIP00000076314Small subunit ribosomal protein S27e. (84 aa)
ENSONIP00000074793Small subunit ribosomal protein S17e. (182 aa)
rps2440S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (132 aa)
ENSONIP00000072598annotation not available (145 aa)
RPL27ARibosomal protein L27a; Belongs to the universal ribosomal protein uL15 family. (181 aa)
rps13Small subunit ribosomal protein S13e. (151 aa)
rpl32Ribosomal protein L32. (150 aa)
rpl35Ribosomal protein L35. (138 aa)
rps18Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family. (1034 aa)
rps20Ribosomal protein S20. (157 aa)
ENSONIP00000060841annotation not available (125 aa)
RPL7ARibosomal protein L7a. (281 aa)
zcchc17Zinc finger, CCHC domain containing 17. (246 aa)
Rpl35aLarge subunit ribosomal protein L35Ae. (110 aa)
fau40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (133 aa)
RPL19Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (194 aa)
rps2Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (279 aa)
mcts1Malignant T-cell-amplified sequence. (181 aa)
rpl30Ribosomal protein L30. (116 aa)
rplp1Ribosomal protein, large, P1; Belongs to the eukaryotic ribosomal protein P1/P2 family. (114 aa)
rps2540S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (128 aa)
rpl1360S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (211 aa)
LOC100701341Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family. (182 aa)
LOC100701613Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family. (184 aa)
LOC100691161Apolipoprotein Db; Belongs to the calycin superfamily. Lipocalin family. (186 aa)
LOC100691432Apolipoprotein Db; Belongs to the calycin superfamily. Lipocalin family. (182 aa)
rpl1860S ribosomal protein L18; Component of the large ribosomal subunit. (188 aa)
rpl28Ribosomal protein L28. (142 aa)
dhx29ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily. (1376 aa)
rpl9Ribosomal protein L9. (192 aa)
rps3a40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (266 aa)
rpl15Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (204 aa)
rpl21Ribosomal protein L21. (160 aa)
rpl6Ribosomal protein L6. (325 aa)
LOC100689943Ribosomal protein S19. (163 aa)
RPL19-2Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (197 aa)
LOC100708525Ribosomal protein L26. (145 aa)
LOC100698589Apolipoprotein Da, duplicate 1; Belongs to the calycin superfamily. Lipocalin family. (186 aa)
rps2640S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (149 aa)
RPS19Ribosomal protein S19. (175 aa)
I3J2M6_ORENIRibosomal protein L36A; Belongs to the eukaryotic ribosomal protein eL42 family. (151 aa)
ENSONIP00000029827annotation not available (173 aa)
rpl3660S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (105 aa)
LOC10070734440S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family. (312 aa)
ENSONIP00000031770annotation not available (203 aa)
RPS17Ribosomal protein S17. (164 aa)
ENSONIP00000032299annotation not available (85 aa)
rpl10Ribosomal protein L10. (285 aa)
rpl24Ribosomal protein L24. (432 aa)
Rpl34Large subunit ribosomal protein L34e. (156 aa)
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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