STRINGSTRING
rps23 rps23 rpl6 rpl6 nufip2 nufip2 I3KA73_ORENI I3KA73_ORENI RPL19 RPL19 rpl30 rpl30 rpl18 rpl18 rpl24 rpl24 ENSONIP00000032299 ENSONIP00000032299 rpl36 rpl36 rps26 rps26 RPL19-2 RPL19-2 abcf1 abcf1 LOC100705032 LOC100705032 ENSONIP00000041950 ENSONIP00000041950 rpl32 rpl32 RPL7A RPL7A rpl31 rpl31 LOC100708980 LOC100708980 BTF3 BTF3 RPS29 RPS29 rpl18a rpl18a
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rps23Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (161 aa)
rpl6Ribosomal protein L6. (325 aa)
nufip2Nuclear FMR1 interacting protein 2. (769 aa)
I3KA73_ORENITranscription factor BTF3; Belongs to the NAC-beta family. (159 aa)
RPL19Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (194 aa)
rpl30Ribosomal protein L30. (116 aa)
rpl1860S ribosomal protein L18; Component of the large ribosomal subunit. (188 aa)
rpl24Ribosomal protein L24. (432 aa)
ENSONIP00000032299annotation not available (85 aa)
rpl3660S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (105 aa)
rps2640S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (149 aa)
RPL19-2Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (197 aa)
abcf1ATP-binding cassette, sub-family F (GCN20), member 1. (819 aa)
LOC100705032Transcription factor BTF3; Belongs to the NAC-beta family. (173 aa)
ENSONIP00000041950Ribosomal protein S28. (63 aa)
rpl32Ribosomal protein L32. (150 aa)
RPL7ARibosomal protein L7a. (281 aa)
rpl31Ribosomal protein L31. (213 aa)
LOC100708980Transcription factor BTF3; Belongs to the NAC-beta family. (158 aa)
BTF3Transcription factor BTF3; Belongs to the NAC-beta family. (164 aa)
RPS29Ribosomal protein S29. (60 aa)
rpl18a60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. (212 aa)
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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