120 items (Oreochromis niloticus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	banf1	Barrier to autointegration factor 1. (90 aa)
	LOC102081615	Si:ch211-168d23.3. (1281 aa)
	ino80	INO80 complex ATPase subunit. (1573 aa)
	LOC100703242	Im:7142702. (837 aa)
	LOC100692760	Protein DEK isoform X2. (515 aa)
	actl6a	Actin-like 6A; Belongs to the actin family. (432 aa)
	dmap1	DNA methyltransferase 1 associated protein 1. (481 aa)
	LOC100708570	Barrier-to-autointegration factor-like protein. (90 aa)
	actr8	Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily. (643 aa)
	actr5	Actin related protein 5; Belongs to the actin family. (625 aa)
	LOC100693961	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1b. (947 aa)
	LOC100694214	GATA zinc finger domain containing 2Ab. (649 aa)
	brd9	Bromodomain containing 9. (671 aa)
	LOC100698445	Uncharacterized protein. (177 aa)
	LOC100707939	LRRcap domain-containing protein. (302 aa)
	bicra	BRD4 interacting chromatin remodeling complex associated protein. (1859 aa)
	lg10h17orf49	Zgc:103508. (276 aa)
	I3JBQ9_ORENI	Si:ch211-59d17.3. (749 aa)
	nfrkb	Nuclear factor related to kappaB binding protein. (1274 aa)
	ino80c	INO80 complex subunit C. (203 aa)
	LOC100691722	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1. (474 aa)
	ash1l	Uncharacterized protein. (2029 aa)
	LOC100705962	Chromodomain helicase DNA binding protein 4a. (1970 aa)
	ing3	Inhibitor of growth protein. (420 aa)
	LOC102079445	PHD-type domain-containing protein. (1421 aa)
	I3JMR8_ORENI	ARID domain-containing protein. (1813 aa)
	hmgxb4	HMG box domain containing 4a. (599 aa)
	ino80d	INO80 complex subunit Da. (1005 aa)
	LOC100698867	Chromodomain helicase DNA binding protein 3. (1822 aa)
	ercc6	Excision repair cross-complementation group 6. (1437 aa)
	ss18	SS18 subunit of BAF chromatin remodeling complex. (382 aa)
	ENSONIP00000012427	Autoimmune regulator. (369 aa)
	LOC100705552	GATA zinc finger domain containing 2A. (735 aa)
	LOC100698109	Methyl-CpG binding domain protein 3. (239 aa)
	gatad2b	GATA zinc finger domain containing 2B. (653 aa)
	BCL11B	BAF chromatin remodeling complex subunit BCL11B. (847 aa)
	BAZ1A	Bromodomain adjacent to zinc finger domain 1A. (1353 aa)
	arid2	AT rich interactive domain 2 (ARID, RFX-like). (1688 aa)
	chd4	Uncharacterized protein. (1977 aa)
	ino80b	INO80 complex subunit B. (342 aa)
	I3KDT0_ORENI	BAF chromatin remodeling complex subunit BCL7A. (168 aa)
	smarcd2	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2. (501 aa)
	dpf1	D4, zinc and double PHD fingers family 1. (391 aa)
	Mybbp1a	MYB binding protein (P160) 1a. (1262 aa)
	I3KP76_ORENI	Snf2-related CREBBP activator protein. (1747 aa)
	I3KRB5_ORENI	AT rich interactive domain 1B (SWI1-like). (1954 aa)
	I3KRF5_ORENI	Polymerase (DNA directed), lambda. (380 aa)
	LOC100707110	Ash1 (absent, small, or homeotic)-like (Drosophila). (2966 aa)
	I3KRY4_ORENI	Polybromo 1. (1678 aa)
	ep400	E1A binding protein p400. (3095 aa)
	I3KRJ8_ORENI	BAF chromatin remodeling complex subunit BCL11A b. (784 aa)
	smarcc2	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2. (1084 aa)
	baz1b	Bromodomain adjacent to zinc finger domain, 1B. (1646 aa)
	mta2	Metastasis associated 1 family, member 2. (667 aa)
	smarca5	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5. (1138 aa)
	LOC102076719	Uncharacterized protein. (96 aa)
	ENSONIP00000035554	annotation not available (937 aa)
	smarce1	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1. (506 aa)
	ENSONIP00000035819	Uncharacterized protein LOC109195385. (757 aa)
	I3JNP8_ORENI	HIT-type domain-containing protein. (137 aa)
	LOC100706337	WD_REPEATS_REGION domain-containing protein. (441 aa)
	LOC100705183	Zinc finger protein 296. (810 aa)
	LOC100696643	Proline-, glutamic acid- and leucine-rich protein 1. (530 aa)
	actr6	Actin related protein 6; Belongs to the actin family. (396 aa)
	ENSONIP00000040761	Uncharacterized protein LOC112845255. (1202 aa)
	ENSONIP00000040885	annotation not available (761 aa)
	LOC112843035	Uncharacterized protein LOC112843035. (850 aa)
	ENSONIP00000041341	Protein NYNRIN isoform X1. (1447 aa)
	Anp32e	Acidic (leucine-rich) nuclear phosphoprotein 32 family, member E. (203 aa)
	LOC100698130	AT rich interactive domain 1Ab (SWI-like). (2303 aa)
	LOC100693327	D4, zinc and double PHD fingers, family 3. (398 aa)
	ENSONIP00000044126	annotation not available (490 aa)
	ENSONIP00000044760	annotation not available (867 aa)
	smarcd1	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1. (514 aa)
	LOC100697452	Remodeling and spacing factor 1b, tandem duplicate 1. (1595 aa)
	LOC100696254	Metastasis associated 1 family, member 3. (700 aa)
	LOC100696262	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family. (402 aa)
	LOC100700092	Uncharacterized protein. (406 aa)
	LOC100692623	D4, zinc and double PHD fingers family 2. (426 aa)
	brd7	Bromodomain containing 7. (614 aa)
	ENSONIP00000047566	annotation not available (761 aa)
	chd5	Chromodomain helicase DNA binding protein 5. (2000 aa)
	ENSONIP00000048009	annotation not available (761 aa)
	LOC100704433	Polybromo 1, like. (1657 aa)
	tfpt	TCF3 fusion partner isoform X3. (220 aa)
	LOC100701408	WW domain binding protein 1. (284 aa)
	Mta1	Metastasis associated 1. (764 aa)
	ino80e	INO80 complex subunit E. (237 aa)
	ENSONIP00000052450	annotation not available (1071 aa)
	smarcc1	Uncharacterized protein. (1138 aa)
	ENSONIP00000054095	annotation not available (668 aa)
	LOC100696470	AT rich interactive domain 1Aa (SWI-like). (2307 aa)
	ENSONIP00000055605	annotation not available (639 aa)
	ENSONIP00000057180	annotation not available (761 aa)
	LOC100704669	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family. (368 aa)
	LOC100691541	CECR2 histone acetyl-lysine reader. (1622 aa)
	I3JG14_ORENI	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3b. (491 aa)
	ENSONIP00000064096	annotation not available (846 aa)
	pole3	Polymerase (DNA directed), epsilon 3 (p17 subunit). (150 aa)
	LOC102083256	Si:ch73-290k24.6. (849 aa)
	BPTF	Bromodomain PHD finger transcription factor. (2654 aa)
	ENSONIP00000068436	annotation not available (761 aa)
	LOC100699402	Si:dkey-226m8.10. (301 aa)
	ENSONIP00000069274	annotation not available (837 aa)
	ENSONIP00000069407	annotation not available (154 aa)
	LOC100690815	Nucleosome-remodeling factor subunit BPTF isoform X2. (3467 aa)
	LOC100711479	Retinoblastoma binding protein 4. (449 aa)
	ENSONIP00000070927	annotation not available (761 aa)
	ENSONIP00000071435	annotation not available (118 aa)
	phf10	PHD finger protein 10. (516 aa)
	I3KYH8_ORENI	Uncharacterized protein. (853 aa)
	ENSONIP00000074511	annotation not available (103 aa)
	ENSONIP00000075348	annotation not available (1068 aa)
	ENSONIP00000076453	annotation not available (477 aa)
	ENSONIP00000076683	annotation not available (568 aa)
	ZNHIT1	Zinc finger, HIT-type containing 1. (157 aa)
	ENSONIP00000077583	annotation not available (568 aa)
	mpnd	MPN domain containing. (494 aa)
	LOC100695351	Retinoblastoma binding protein 4, like. (479 aa)
	chrac1	Chromatin accessibility complex subunit 1. (122 aa)

Your Current Organism:

Oreochromis niloticus

NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BAZ1A	ENSONIP00000012427	ENSONIP00000014332	ENSONIP00000012427	Bromodomain adjacent to zinc finger domain 1A.	Autoimmune regulator.	0.449
BAZ1A	I3KP76_ORENI	ENSONIP00000014332	ENSONIP00000022921	Bromodomain adjacent to zinc finger domain 1A.	Snf2-related CREBBP activator protein.	0.464
BAZ1A	LOC100691541	ENSONIP00000014332	ENSONIP00000058803	Bromodomain adjacent to zinc finger domain 1A.	CECR2 histone acetyl-lysine reader.	0.644
BAZ1A	LOC100692760	ENSONIP00000014332	ENSONIP00000001941	Bromodomain adjacent to zinc finger domain 1A.	Protein DEK isoform X2.	0.633
BAZ1A	LOC100698867	ENSONIP00000014332	ENSONIP00000011685	Bromodomain adjacent to zinc finger domain 1A.	Chromodomain helicase DNA binding protein 3.	0.449
BAZ1A	LOC100705962	ENSONIP00000014332	ENSONIP00000008816	Bromodomain adjacent to zinc finger domain 1A.	Chromodomain helicase DNA binding protein 4a.	0.449
BAZ1A	Mybbp1a	ENSONIP00000014332	ENSONIP00000021905	Bromodomain adjacent to zinc finger domain 1A.	MYB binding protein (P160) 1a.	0.682
BAZ1A	baz1b	ENSONIP00000014332	ENSONIP00000031217	Bromodomain adjacent to zinc finger domain 1A.	Bromodomain adjacent to zinc finger domain, 1B.	0.445
BAZ1A	chd4	ENSONIP00000014332	ENSONIP00000016292	Bromodomain adjacent to zinc finger domain 1A.	Uncharacterized protein.	0.449
BAZ1A	chd5	ENSONIP00000014332	ENSONIP00000048001	Bromodomain adjacent to zinc finger domain 1A.	Chromodomain helicase DNA binding protein 5.	0.449
BAZ1A	chrac1	ENSONIP00000014332	ENSONIP00000080752	Bromodomain adjacent to zinc finger domain 1A.	Chromatin accessibility complex subunit 1.	0.905
BAZ1A	ep400	ENSONIP00000014332	ENSONIP00000029313	Bromodomain adjacent to zinc finger domain 1A.	E1A binding protein p400.	0.464
BAZ1A	ercc6	ENSONIP00000014332	ENSONIP00000012042	Bromodomain adjacent to zinc finger domain 1A.	Excision repair cross-complementation group 6.	0.668
BAZ1A	ino80	ENSONIP00000014332	ENSONIP00000000976	Bromodomain adjacent to zinc finger domain 1A.	INO80 complex ATPase subunit.	0.451
BAZ1A	pole3	ENSONIP00000014332	ENSONIP00000065492	Bromodomain adjacent to zinc finger domain 1A.	Polymerase (DNA directed), epsilon 3 (p17 subunit).	0.948
BAZ1A	smarca5	ENSONIP00000014332	ENSONIP00000034506	Bromodomain adjacent to zinc finger domain 1A.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.	0.992
BCL11B	LOC100695351	ENSONIP00000013922	ENSONIP00000079377	BAF chromatin remodeling complex subunit BCL11B.	Retinoblastoma binding protein 4, like.	0.423
BCL11B	LOC100706337	ENSONIP00000013922	ENSONIP00000038174	BAF chromatin remodeling complex subunit BCL11B.	WD_REPEATS_REGION domain-containing protein.	0.423
BCL11B	LOC100711479	ENSONIP00000013922	ENSONIP00000070642	BAF chromatin remodeling complex subunit BCL11B.	Retinoblastoma binding protein 4.	0.423
BPTF	LOC100695351	ENSONIP00000067648	ENSONIP00000079377	Bromodomain PHD finger transcription factor.	Retinoblastoma binding protein 4, like.	0.663