34 items (Oreochromis niloticus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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protein homology

Your Input:
	shprh	SNF2 histone linker PHD RING helicase. (1661 aa)
	hltf	Helicase-like transcription factor. (968 aa)
	ino80	INO80 complex ATPase subunit. (1573 aa)
	LOC100690413	Uncharacterized protein. (1900 aa)
	fsbp	RAD54 homolog B. (928 aa)
	LOC100705962	Chromodomain helicase DNA binding protein 4a. (1970 aa)
	rad54l	RAD54 like. (739 aa)
	smarca4	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4a. (1628 aa)
	SMARCAL1	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1; Belongs to the SNF2/RAD54 helicase family. SMARCAL1 subfamily. (900 aa)
	LOC100698867	Chromodomain helicase DNA binding protein 3. (1822 aa)
	ercc6	Excision repair cross-complementation group 6. (1437 aa)
	zranb3	Zinc finger, RAN-binding domain containing 3. (1150 aa)
	chd4	Uncharacterized protein. (1977 aa)
	hells	Helicase, lymphoid specific. (854 aa)
	LOC100702572	RAD54 like 2. (1514 aa)
	btaf1	BTAF1 RNA polymerase II, B-TFIID transcription factor-associated. (1860 aa)
	smarcad1	Uncharacterized protein. (1081 aa)
	chd2	Chromodomain helicase DNA binding protein 2. (1811 aa)
	ercc6l2	Excision repair cross-complementation group 6-like 2. (1521 aa)
	chd8	Chromodomain-helicase-DNA-binding protein 8; DNA helicase that acts as a chromatin remodeling factor and regulates transcription. Acts as a transcription repressor by remodeling chromatin structure and recruiting histone H1 to target genes. Suppresses p53/TP53-mediated apoptosis by recruiting histone H1 and preventing p53/TP53 transactivation activity. Acts as a negative regulator of Wnt signaling pathway by regulating beta-catenin (CTNNB1) activity. Negatively regulates CTNNB1-targeted gene expression by being recruited specifically to the promoter regions of several CTNNB1 responsive [...] (2621 aa)
	ttf2	Transcription termination factor, RNA polymerase II. (1258 aa)
	I3KNN9_ORENI	Uncharacterized protein. (1608 aa)
	I3KP76_ORENI	Snf2-related CREBBP activator protein. (1747 aa)
	ep400	E1A binding protein p400. (3095 aa)
	Chd7	Chromodomain helicase DNA binding protein 7. (2854 aa)
	smarca5	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5. (1138 aa)
	chd1	Chromodomain helicase DNA binding protein 1. (1695 aa)
	I3IV57_ORENI	Chromodomain helicase DNA binding protein 6. (2730 aa)
	chd5	Chromodomain helicase DNA binding protein 5. (2000 aa)
	chd9	Chromodomain helicase DNA binding protein 9. (3005 aa)
	atrx	ATRX chromatin remodeler. (1852 aa)
	LOC100699288	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2. (1626 aa)
	LOC100705676	Uncharacterized protein. (1514 aa)
	Chd1l	Chromodomain helicase DNA binding protein 1-like. (1013 aa)

Your Current Organism:

Oreochromis niloticus

NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Chd1l	Chd7	ENSONIP00000081597	ENSONIP00000031172	Chromodomain helicase DNA binding protein 1-like.	Chromodomain helicase DNA binding protein 7.	0.412
Chd1l	I3IV57_ORENI	ENSONIP00000081597	ENSONIP00000040153	Chromodomain helicase DNA binding protein 1-like.	Chromodomain helicase DNA binding protein 6.	0.413
Chd1l	I3KP76_ORENI	ENSONIP00000081597	ENSONIP00000022921	Chromodomain helicase DNA binding protein 1-like.	Snf2-related CREBBP activator protein.	0.403
Chd1l	btaf1	ENSONIP00000081597	ENSONIP00000018677	Chromodomain helicase DNA binding protein 1-like.	BTAF1 RNA polymerase II, B-TFIID transcription factor-associated.	0.525
Chd1l	chd1	ENSONIP00000081597	ENSONIP00000040105	Chromodomain helicase DNA binding protein 1-like.	Chromodomain helicase DNA binding protein 1.	0.421
Chd1l	chd2	ENSONIP00000081597	ENSONIP00000019051	Chromodomain helicase DNA binding protein 1-like.	Chromodomain helicase DNA binding protein 2.	0.420
Chd1l	chd8	ENSONIP00000081597	ENSONIP00000019592	Chromodomain helicase DNA binding protein 1-like.	Chromodomain-helicase-DNA-binding protein 8; DNA helicase that acts as a chromatin remodeling factor and regulates transcription. Acts as a transcription repressor by remodeling chromatin structure and recruiting histone H1 to target genes. Suppresses p53/TP53-mediated apoptosis by recruiting histone H1 and preventing p53/TP53 transactivation activity. Acts as a negative regulator of Wnt signaling pathway by regulating beta-catenin (CTNNB1) activity. Negatively regulates CTNNB1-targeted gene expression by being recruited specifically to the promoter regions of several CTNNB1 responsive [...]	0.414
Chd1l	chd9	ENSONIP00000081597	ENSONIP00000053859	Chromodomain helicase DNA binding protein 1-like.	Chromodomain helicase DNA binding protein 9.	0.419
Chd1l	ercc6	ENSONIP00000081597	ENSONIP00000012042	Chromodomain helicase DNA binding protein 1-like.	Excision repair cross-complementation group 6.	0.655
Chd1l	ercc6l2	ENSONIP00000081597	ENSONIP00000019055	Chromodomain helicase DNA binding protein 1-like.	Excision repair cross-complementation group 6-like 2.	0.546
Chd1l	hltf	ENSONIP00000081597	ENSONIP00000000933	Chromodomain helicase DNA binding protein 1-like.	Helicase-like transcription factor.	0.565
Chd1l	ino80	ENSONIP00000081597	ENSONIP00000000976	Chromodomain helicase DNA binding protein 1-like.	INO80 complex ATPase subunit.	0.523
Chd1l	smarcad1	ENSONIP00000081597	ENSONIP00000018956	Chromodomain helicase DNA binding protein 1-like.	Uncharacterized protein.	0.428
Chd7	Chd1l	ENSONIP00000031172	ENSONIP00000081597	Chromodomain helicase DNA binding protein 7.	Chromodomain helicase DNA binding protein 1-like.	0.412
Chd7	chd4	ENSONIP00000031172	ENSONIP00000016292	Chromodomain helicase DNA binding protein 7.	Uncharacterized protein.	0.424
Chd7	hells	ENSONIP00000031172	ENSONIP00000016561	Chromodomain helicase DNA binding protein 7.	Helicase, lymphoid specific.	0.401
Chd7	smarca5	ENSONIP00000031172	ENSONIP00000034506	Chromodomain helicase DNA binding protein 7.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.	0.610
I3IV57_ORENI	Chd1l	ENSONIP00000040153	ENSONIP00000081597	Chromodomain helicase DNA binding protein 6.	Chromodomain helicase DNA binding protein 1-like.	0.413
I3IV57_ORENI	hells	ENSONIP00000040153	ENSONIP00000016561	Chromodomain helicase DNA binding protein 6.	Helicase, lymphoid specific.	0.403
I3IV57_ORENI	smarca5	ENSONIP00000040153	ENSONIP00000034506	Chromodomain helicase DNA binding protein 6.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.	0.610