STRINGSTRING
chd1 chd1 Chd1l Chd1l helq helq ddx6 ddx6 LOC100708206 LOC100708206 ddx3x ddx3x ddx24 ddx24 dhx33 dhx33 recql recql LOC100712452 LOC100712452 dhx35 dhx35 ddx31 ddx31 LOC100705676 LOC100705676 ddx20 ddx20 ddx52 ddx52 DDX41 DDX41 LOC100699288 LOC100699288 ddx4 ddx4 DDX39A DDX39A atrx atrx DHX15-2 DHX15-2 eif4a2 eif4a2 Ddx42 Ddx42 ifih1 ifih1 LOC100704968 LOC100704968 YTHDC2 YTHDC2 Dhx40 Dhx40 chd9 chd9 dhx37 dhx37 LOC100693841 LOC100693841 eif4a3 eif4a3 dhx38 dhx38 chd5 chd5 DDX17 DDX17 ddx47 ddx47 polq polq LOC100709718 LOC100709718 I3IV57_ORENI I3IV57_ORENI LOC100707815 LOC100707815 ddx23 ddx23 dhx34 dhx34 LOC100696971 LOC100696971 smarca5 smarca5 ddx56 ddx56 Chd7 Chd7 ep400 ep400 LOC100698984 LOC100698984 LOC100711348 LOC100711348 ddx28 ddx28 I3KW58_ORENI I3KW58_ORENI ddx27 ddx27 recql5 recql5 LOC100693948 LOC100693948 DDX5 DDX5 dhx8 dhx8 I3KP76_ORENI I3KP76_ORENI I3KNN9_ORENI I3KNN9_ORENI ddx46 ddx46 dhx57 dhx57 LOC100707688 LOC100707688 Ascc3 Ascc3 ttf2 ttf2 chd8 chd8 ddx55 ddx55 blm blm ercc6l2 ercc6l2 chd2 chd2 smarcad1 smarcad1 btaf1 btaf1 LOC100702572 LOC100702572 skiv2l skiv2l hells hells chd4 chd4 ddx49 ddx49 dqx1 dqx1 ddx59 ddx59 zranb3 zranb3 snrnp200 snrnp200 I3JWW9_ORENI I3JWW9_ORENI I3JW57_ORENI I3JW57_ORENI dhx30 dhx30 ercc6 ercc6 LOC100698867 LOC100698867 SMARCAL1 SMARCAL1 smarca4 smarca4 ddx18 ddx18 rad54l rad54l mtrex mtrex dhx29 dhx29 Ddx10 Ddx10 LOC100705962 LOC100705962 fsbp fsbp ddx21 ddx21 LOC102081219 LOC102081219 LOC100690413 LOC100690413 dhx36 dhx36 fancm fancm ercc3 ercc3 dhx16 dhx16 ddx51 ddx51 ddx43 ddx43 ino80 ino80 hltf hltf shprh shprh ddx1 ddx1 dhx9 dhx9
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
chd1Chromodomain helicase DNA binding protein 1. (1695 aa)
Chd1lChromodomain helicase DNA binding protein 1-like. (1013 aa)
helqHelicase, POLQ like. (999 aa)
ddx6DEAD (Asp-Glu-Ala-Asp) box helicase 6; Belongs to the DEAD box helicase family. (483 aa)
LOC100708206Uncharacterized protein; Belongs to the DEAD box helicase family. (741 aa)
ddx3xDEAD-box helicase 3 X-linked a; Belongs to the DEAD box helicase family. (792 aa)
ddx24DEAD (Asp-Glu-Ala-Asp) box helicase 24. (870 aa)
dhx33DEAH (Asp-Glu-Ala-His) box polypeptide 33. (681 aa)
recqlATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (835 aa)
LOC100712452DEAD (Asp-Glu-Ala-Asp) box helicase 5; Belongs to the DEAD box helicase family. (652 aa)
dhx35DEAH-box helicase 35. (706 aa)
ddx31RNA helicase. (689 aa)
LOC100705676Uncharacterized protein. (1514 aa)
ddx20DEAD (Asp-Glu-Ala-Asp) box polypeptide 20; Belongs to the DEAD box helicase family. (827 aa)
ddx52DEAD (Asp-Glu-Ala-Asp) box polypeptide 52. (679 aa)
DDX41DEAD-box helicase 41. (614 aa)
LOC100699288SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2. (1626 aa)
ddx4DEAD (Asp-Glu-Ala-Asp) box polypeptide 4; Belongs to the DEAD box helicase family. (651 aa)
DDX39ADExD-box helicase 39A. (443 aa)
atrxATRX chromatin remodeler. (1852 aa)
DHX15-2DEAH-box helicase 15. (775 aa)
eif4a2Eukaryotic translation initiation factor 4A, isoform 2; Belongs to the DEAD box helicase family. (411 aa)
Ddx42DEAD (Asp-Glu-Ala-Asp) box helicase 42. (926 aa)
ifih1Interferon induced with helicase C domain 1. (1036 aa)
LOC100704968Uncharacterized protein. (440 aa)
YTHDC2YTH domain containing 2. (1360 aa)
Dhx40DEAH (Asp-Glu-Ala-His) box polypeptide 40. (763 aa)
chd9Chromodomain helicase DNA binding protein 9. (3005 aa)
dhx37DEAH (Asp-Glu-Ala-His) box polypeptide 37. (1150 aa)
LOC100693841Eukaryotic translation initiation factor 4A1B; Belongs to the DEAD box helicase family. (421 aa)
eif4a3Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. (423 aa)
dhx38DEAH (Asp-Glu-Ala-His) box polypeptide 38. (1261 aa)
chd5Chromodomain helicase DNA binding protein 5. (2000 aa)
DDX17DEAD-box helicase 17; Belongs to the DEAD box helicase family. (652 aa)
ddx47DEAD (Asp-Glu-Ala-Asp) box polypeptide 47; Belongs to the DEAD box helicase family. (479 aa)
polqPolymerase (DNA directed), theta. (2783 aa)
LOC100709718DEAH (Asp-Glu-Ala-His) box helicase 15. (751 aa)
I3IV57_ORENIChromodomain helicase DNA binding protein 6. (2730 aa)
LOC100707815Uncharacterized protein; Belongs to the DEAD box helicase family. (534 aa)
ddx23DEAD (Asp-Glu-Ala-Asp) box polypeptide 23. (834 aa)
dhx34DEAH (Asp-Glu-Ala-His) box polypeptide 34. (1172 aa)
LOC100696971Uncharacterized protein; Belongs to the DEAD box helicase family. (633 aa)
smarca5SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5. (1138 aa)
ddx56DEAD (Asp-Glu-Ala-Asp) box helicase 56. (560 aa)
Chd7Chromodomain helicase DNA binding protein 7. (2854 aa)
ep400E1A binding protein p400. (3095 aa)
LOC100698984DEAD (Asp-Glu-Ala-Asp) box helicase 61; Belongs to the DEAD box helicase family. (478 aa)
LOC100711348DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B. (455 aa)
ddx28DEAD (Asp-Glu-Ala-Asp) box polypeptide 28. (561 aa)
I3KW58_ORENITudor domain containing 9. (1228 aa)
ddx27DEAD (Asp-Glu-Ala-Asp) box polypeptide 27; Belongs to the DEAD box helicase family. (758 aa)
recql5RecQ helicase-like 5. (1019 aa)
LOC100693948DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 19 (DBP5 homolog, yeast). (483 aa)
DDX5DEAD-box helicase 5; Belongs to the DEAD box helicase family. (675 aa)
dhx8DEAH (Asp-Glu-Ala-His) box polypeptide 8. (1213 aa)
I3KP76_ORENISnf2-related CREBBP activator protein. (1747 aa)
I3KNN9_ORENIUncharacterized protein. (1608 aa)
ddx46DEAD (Asp-Glu-Ala-Asp) box polypeptide 46. (1181 aa)
dhx57DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57. (1432 aa)
LOC100707688Zgc:193690. (485 aa)
Ascc3Activating signal cointegrator 1 complex subunit 3. (2200 aa)
ttf2Transcription termination factor, RNA polymerase II. (1258 aa)
chd8Chromodomain-helicase-DNA-binding protein 8; DNA helicase that acts as a chromatin remodeling factor and regulates transcription. Acts as a transcription repressor by remodeling chromatin structure and recruiting histone H1 to target genes. Suppresses p53/TP53-mediated apoptosis by recruiting histone H1 and preventing p53/TP53 transactivation activity. Acts as a negative regulator of Wnt signaling pathway by regulating beta-catenin (CTNNB1) activity. Negatively regulates CTNNB1-targeted gene expression by being recruited specifically to the promoter regions of several CTNNB1 responsive [...] (2621 aa)
ddx55RNA helicase. (597 aa)
blmBLM RecQ like helicase. (1407 aa)
ercc6l2Excision repair cross-complementation group 6-like 2. (1521 aa)
chd2Chromodomain helicase DNA binding protein 2. (1811 aa)
smarcad1Uncharacterized protein. (1081 aa)
btaf1BTAF1 RNA polymerase II, B-TFIID transcription factor-associated. (1860 aa)
LOC100702572RAD54 like 2. (1514 aa)
skiv2lSKI2 homolog, superkiller viralicidic activity 2-like. (1244 aa)
hellsHelicase, lymphoid specific. (854 aa)
chd4Uncharacterized protein. (1977 aa)
ddx49DEAD (Asp-Glu-Ala-Asp) box polypeptide 49; Belongs to the DEAD box helicase family. (477 aa)
dqx1DEAQ box RNA-dependent ATPase 1. (817 aa)
ddx59DEAD (Asp-Glu-Ala-Asp) box polypeptide 59. (638 aa)
zranb3Zinc finger, RAN-binding domain containing 3. (1150 aa)
snrnp200Small nuclear ribonucleoprotein 200 (U5). (2136 aa)
I3JWW9_ORENITudor domain containing 12. (1141 aa)
I3JW57_ORENIDicer 1, ribonuclease type III; Belongs to the helicase family. Dicer subfamily. (1892 aa)
dhx30DEAH (Asp-Glu-Ala-His) box helicase 30. (1156 aa)
ercc6Excision repair cross-complementation group 6. (1437 aa)
LOC100698867Chromodomain helicase DNA binding protein 3. (1822 aa)
SMARCAL1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1; Belongs to the SNF2/RAD54 helicase family. SMARCAL1 subfamily. (900 aa)
smarca4SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4a. (1628 aa)
ddx18RNA helicase. (656 aa)
rad54lRAD54 like. (739 aa)
mtrexMtr4 exosome RNA helicase. (1037 aa)
dhx29ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily. (1376 aa)
Ddx10RNA helicase. (919 aa)
LOC100705962Chromodomain helicase DNA binding protein 4a. (1970 aa)
fsbpRAD54 homolog B. (928 aa)
ddx21DEAD (Asp-Glu-Ala-Asp) box helicase 21. (812 aa)
LOC102081219SUV3-like helicase. (784 aa)
LOC100690413Uncharacterized protein. (1900 aa)
dhx36DEAH (Asp-Glu-Ala-His) box polypeptide 36. (1064 aa)
fancmUncharacterized protein. (2090 aa)
ercc3Excision repair cross-complementation group 3. (802 aa)
dhx16DEAH (Asp-Glu-Ala-His) box polypeptide 16. (1055 aa)
ddx51DEAD (Asp-Glu-Ala-Asp) box polypeptide 51; Belongs to the DEAD box helicase family. (621 aa)
ddx43DEAD (Asp-Glu-Ala-Asp) box polypeptide 43; Belongs to the DEAD box helicase family. (687 aa)
ino80INO80 complex ATPase subunit. (1573 aa)
hltfHelicase-like transcription factor. (968 aa)
shprhSNF2 histone linker PHD RING helicase. (1661 aa)
ddx1DEAD (Asp-Glu-Ala-Asp) box helicase 1. (740 aa)
dhx9DEAH (Asp-Glu-Ala-His) box helicase 9. (1288 aa)
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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