STRINGSTRING
ctnna2 ctnna2 Vcl Vcl ctnnal1 ctnnal1 ctnna1 ctnna1 LOC100707163 LOC100707163
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ctnna2Catenin (cadherin-associated protein), alpha 2. (939 aa)
VclVinculin b. (1097 aa)
ctnnal1Catenin (cadherin-associated protein), alpha-like 1. (756 aa)
ctnna1Catenin (cadherin-associated protein), alpha 1. (948 aa)
LOC100707163Vinculin a. (1158 aa)
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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