STRINGSTRING
xdh xdh mrpl39 mrpl39 aox1 aox1 drg2 drg2 fdx2 fdx2 Tars Tars LOC100712084 LOC100712084 LOC100693747 LOC100693747 drg1 drg1 SDHB SDHB LOC100712451 LOC100712451 urm1 urm1 LOC100709798 LOC100709798 FDX1 FDX1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
xdhXanthine dehydrogenase. (1355 aa)
mrpl39Mitochondrial ribosomal protein L39. (335 aa)
aox1Aldehyde oxidase 6. (1332 aa)
drg2Developmentally regulated GTP binding protein 2. (364 aa)
fdx2Ferredoxin 2. (196 aa)
TarsThreonyl-tRNA synthetase. (778 aa)
LOC100712084Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q). (351 aa)
LOC100693747Threonyl-tRNA synthetase-like 2. (830 aa)
drg1Developmentally regulated GTP binding protein 1. (377 aa)
SDHBSuccinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q). (282 aa)
LOC100712451Obg-like ATPase 1; Hydrolyzes ATP, and can also hydrolyze GTP with lower efficiency. Has lower affinity for GTP. (395 aa)
urm1Ubiquitin-related modifier 1; Acts as a sulfur carrier required for 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Serves as sulfur donor in tRNA 2-thiolation reaction by being thiocarboxylated (-COSH) at its C-terminus by MOCS3. The sulfur is then transferred to tRNA to form 2-thiolation of mcm(5)S(2)U. Also acts as a ubiquitin-like protein (UBL) that is covalently conjugated via an isopeptide bond to lysine residues of target proteins. The thiocarboxylated form serves as substrate for conjugation and oxidative stress specifically [...] (97 aa)
LOC100709798AA_TRNA_LIGASE_II domain-containing protein. (694 aa)
FDX1Ferredoxin 1. (147 aa)
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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