(24 nodes) PAS fold network (Oreochromis niloticus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC100711615	Aryl hydrocarbon receptor 1b. (941 aa)
	LOC100711884	Uncharacterized protein. (973 aa)
	LOC100707622	Aryl hydrocarbon receptor 2. (960 aa)
	ncoa2	Nuclear receptor coactivator 2. (1538 aa)
	ahrr	Uncharacterized protein. (714 aa)
	pde8a	Phosphodiesterase. (818 aa)
	epas1	Endothelial PAS domain protein 1b. (879 aa)
	LOC100691220	Neuronal PAS domain protein 2. (879 aa)
	LOC100708914	Aryl hydrocarbon receptor nuclear translocator. (793 aa)
	LOC100703460	Clock circadian regulator b. (887 aa)
	ncoa1	Nuclear receptor coactivator 1. (1501 aa)
	SIM1	SIM bHLH transcription factor 1a. (754 aa)
	NCOA3	Nuclear receptor coactivator. (1521 aa)
	I3KLP3_ORENI	Uncharacterized protein. (658 aa)
	LOC100708832	Hypoxia inducible factor 1 subunit alpha, like. (679 aa)
	NPAS3	Neuronal PAS domain protein 3. (1066 aa)
	I3KBK4_ORENI	Uncharacterized protein. (750 aa)
	Arnt2	Aryl-hydrocarbon receptor nuclear translocator 2. (732 aa)
	I3KWU7_ORENI	Nuclear receptor coactivator 3. (1514 aa)
	arntl	Aryl hydrocarbon receptor nuclear translocator-like 1a. (638 aa)
	ARNTL2	Aryl hydrocarbon receptor nuclear translocator like 2. (662 aa)
	CLOCK	Clock circadian regulator a. (871 aa)
	LOC100711812	Aryl hydrocarbon receptor nuclear translocator-like 2. (643 aa)
	LOC100698057	Nuclear receptor coactivator. (1528 aa)

Your Current Organism:

Oreochromis niloticus

NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARNTL2	CLOCK	ENSONIP00000068780	ENSONIP00000062549	Aryl hydrocarbon receptor nuclear translocator like 2.	Clock circadian regulator a.	0.806
ARNTL2	I3KBK4_ORENI	ENSONIP00000068780	ENSONIP00000038758	Aryl hydrocarbon receptor nuclear translocator like 2.	Uncharacterized protein.	0.504
ARNTL2	I3KLP3_ORENI	ENSONIP00000068780	ENSONIP00000022038	Aryl hydrocarbon receptor nuclear translocator like 2.	Uncharacterized protein.	0.419
ARNTL2	LOC100691220	ENSONIP00000068780	ENSONIP00000005623	Aryl hydrocarbon receptor nuclear translocator like 2.	Neuronal PAS domain protein 2.	0.839
ARNTL2	LOC100703460	ENSONIP00000068780	ENSONIP00000011060	Aryl hydrocarbon receptor nuclear translocator like 2.	Clock circadian regulator b.	0.839
ARNTL2	LOC100707622	ENSONIP00000068780	ENSONIP00000015386	Aryl hydrocarbon receptor nuclear translocator like 2.	Aryl hydrocarbon receptor 2.	0.612
ARNTL2	LOC100708832	ENSONIP00000068780	ENSONIP00000056172	Aryl hydrocarbon receptor nuclear translocator like 2.	Hypoxia inducible factor 1 subunit alpha, like.	0.595
ARNTL2	LOC100711615	ENSONIP00000068780	ENSONIP00000012856	Aryl hydrocarbon receptor nuclear translocator like 2.	Aryl hydrocarbon receptor 1b.	0.612
ARNTL2	LOC100711884	ENSONIP00000068780	ENSONIP00000012863	Aryl hydrocarbon receptor nuclear translocator like 2.	Uncharacterized protein.	0.612
ARNTL2	NPAS3	ENSONIP00000068780	ENSONIP00000039933	Aryl hydrocarbon receptor nuclear translocator like 2.	Neuronal PAS domain protein 3.	0.595
ARNTL2	SIM1	ENSONIP00000068780	ENSONIP00000020837	Aryl hydrocarbon receptor nuclear translocator like 2.	SIM bHLH transcription factor 1a.	0.505
ARNTL2	ahrr	ENSONIP00000068780	ENSONIP00000079937	Aryl hydrocarbon receptor nuclear translocator like 2.	Uncharacterized protein.	0.612
ARNTL2	epas1	ENSONIP00000068780	ENSONIP00000001884	Aryl hydrocarbon receptor nuclear translocator like 2.	Endothelial PAS domain protein 1b.	0.595
Arnt2	I3KBK4_ORENI	ENSONIP00000027420	ENSONIP00000038758	Aryl-hydrocarbon receptor nuclear translocator 2.	Uncharacterized protein.	0.694
Arnt2	I3KLP3_ORENI	ENSONIP00000027420	ENSONIP00000022038	Aryl-hydrocarbon receptor nuclear translocator 2.	Uncharacterized protein.	0.694
Arnt2	LOC100707622	ENSONIP00000027420	ENSONIP00000015386	Aryl-hydrocarbon receptor nuclear translocator 2.	Aryl hydrocarbon receptor 2.	0.882
Arnt2	LOC100708832	ENSONIP00000027420	ENSONIP00000056172	Aryl-hydrocarbon receptor nuclear translocator 2.	Hypoxia inducible factor 1 subunit alpha, like.	0.870
Arnt2	LOC100711615	ENSONIP00000027420	ENSONIP00000012856	Aryl-hydrocarbon receptor nuclear translocator 2.	Aryl hydrocarbon receptor 1b.	0.840
Arnt2	LOC100711884	ENSONIP00000027420	ENSONIP00000012863	Aryl-hydrocarbon receptor nuclear translocator 2.	Uncharacterized protein.	0.840
Arnt2	NPAS3	ENSONIP00000027420	ENSONIP00000039933	Aryl-hydrocarbon receptor nuclear translocator 2.	Neuronal PAS domain protein 3.	0.850