7 items (Oreochromis niloticus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	fau	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (133 aa)
	uba52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
	UHRF2	Ubiquitin like with PHD and ring finger domains 2. (917 aa)
	rps27a	Ribosomal protein S27a. (156 aa)
	zfand4	Zinc finger, AN1-type domain 4. (733 aa)
	LOC100700609	Ubiquitin domain containing 1b. (246 aa)
	LOC100712015	Ubiquitin domain containing 2. (339 aa)

Your Current Organism:

Oreochromis niloticus

NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
fau	rps27a	ENSONIP00000001083	ENSONIP00000020250	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	Ribosomal protein S27a.	0.999
fau	uba52	ENSONIP00000001083	ENSONIP00000016035	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.999
fau	zfand4	ENSONIP00000001083	ENSONIP00000023133	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	Zinc finger, AN1-type domain 4.	0.930
rps27a	fau	ENSONIP00000020250	ENSONIP00000001083	Ribosomal protein S27a.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.999
rps27a	uba52	ENSONIP00000020250	ENSONIP00000016035	Ribosomal protein S27a.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.999
rps27a	zfand4	ENSONIP00000020250	ENSONIP00000023133	Ribosomal protein S27a.	Zinc finger, AN1-type domain 4.	0.999
uba52	fau	ENSONIP00000016035	ENSONIP00000001083	Ubiquitin A-52 residue ribosomal protein fusion product 1.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.999
uba52	rps27a	ENSONIP00000016035	ENSONIP00000020250	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Ribosomal protein S27a.	0.999
uba52	zfand4	ENSONIP00000016035	ENSONIP00000023133	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Zinc finger, AN1-type domain 4.	0.999
zfand4	fau	ENSONIP00000023133	ENSONIP00000001083	Zinc finger, AN1-type domain 4.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.930
zfand4	rps27a	ENSONIP00000023133	ENSONIP00000020250	Zinc finger, AN1-type domain 4.	Ribosomal protein S27a.	0.999
zfand4	uba52	ENSONIP00000023133	ENSONIP00000016035	Zinc finger, AN1-type domain 4.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.999