STRINGSTRING
rps27a rps27a kxd1 kxd1 rfc2 rfc2 rev1 rev1 uba52 uba52 rfc3 rfc3 LOC100701531 LOC100701531 rfc5 rfc5 rfc1 rfc1 mad2l2 mad2l2 ENSONIP00000002713 ENSONIP00000002713 rpa3 rpa3 pcna pcna rpa1 rpa1 rev3l rev3l LOC100697269 LOC100697269 ENSONIP00000047919 ENSONIP00000047919 RCBTB1 RCBTB1 RPA1 RPA1 meiob meiob rfc4 rfc4 LOC102079736 LOC102079736 rpa2 rpa2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rps27aRibosomal protein S27a. (156 aa)
kxd1KxDL motif containing 1. (184 aa)
rfc2Replication factor C (activator 1) 2. (361 aa)
rev1REV1 DNA directed polymerase. (1383 aa)
uba52Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
rfc3Replication factor C (activator 1) 3. (356 aa)
LOC100701531Regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1. (591 aa)
rfc5Replication factor C (activator 1) 5. (341 aa)
rfc1Replication factor C subunit 1. (1169 aa)
mad2l2Mitotic arrest deficient 2 like 2. (222 aa)
ENSONIP00000002713annotation not available (760 aa)
rpa3Replication protein A3. (122 aa)
pcnaProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
rpa1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (602 aa)
rev3lREV3 like, DNA directed polymerase zeta catalytic subunit. (3012 aa)
LOC100697269Regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2. (559 aa)
ENSONIP00000047919Ubiquitin B. (354 aa)
RCBTB1RCC1 and BTB domain containing protein 1. (571 aa)
RPA1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (665 aa)
meiobMethionine sulfoxide reductase B1b. (464 aa)
rfc4Replication factor C (activator 1) 4. (358 aa)
LOC102079736Uncharacterized protein. (966 aa)
rpa2Replication protein A2. (278 aa)
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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