11 items (Oreochromis niloticus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	fndc3a	Fibronectin type III domain containing 3A. (1239 aa)
	LOC100701023	WW domain containing E3 ubiquitin protein ligase 1. (961 aa)
	SRC	Tyrosine-protein kinase. (550 aa)
	LOC100697163	E3 ubiquitin-protein ligase. (888 aa)
	uba52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
	rps27a	Ribosomal protein S27a. (156 aa)
	I3JEG4_ORENI	NEDD4 E3 ubiquitin protein ligase a. (960 aa)
	ENSONIP00000047919	Ubiquitin B. (354 aa)
	LOC100699012	Fibronectin type III domain containing 3Ba. (1174 aa)
	LOC100694718	E3 ubiquitin-protein ligase. (877 aa)
	LOC100692677	Tyrosine-protein kinase. (593 aa)

Your Current Organism:

Oreochromis niloticus

NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSONIP00000047919	I3JEG4_ORENI	ENSONIP00000047919	ENSONIP00000035704	Ubiquitin B.	NEDD4 E3 ubiquitin protein ligase a.	0.800
ENSONIP00000047919	LOC100692677	ENSONIP00000047919	ENSONIP00000059722	Ubiquitin B.	Tyrosine-protein kinase.	0.478
ENSONIP00000047919	LOC100694718	ENSONIP00000047919	ENSONIP00000056551	Ubiquitin B.	E3 ubiquitin-protein ligase.	0.888
ENSONIP00000047919	LOC100697163	ENSONIP00000047919	ENSONIP00000011573	Ubiquitin B.	E3 ubiquitin-protein ligase.	0.888
ENSONIP00000047919	LOC100701023	ENSONIP00000047919	ENSONIP00000004518	Ubiquitin B.	WW domain containing E3 ubiquitin protein ligase 1.	0.806
ENSONIP00000047919	SRC	ENSONIP00000047919	ENSONIP00000008685	Ubiquitin B.	Tyrosine-protein kinase.	0.478
ENSONIP00000047919	rps27a	ENSONIP00000047919	ENSONIP00000020250	Ubiquitin B.	Ribosomal protein S27a.	0.994
ENSONIP00000047919	uba52	ENSONIP00000047919	ENSONIP00000016035	Ubiquitin B.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.997
I3JEG4_ORENI	ENSONIP00000047919	ENSONIP00000035704	ENSONIP00000047919	NEDD4 E3 ubiquitin protein ligase a.	Ubiquitin B.	0.800
I3JEG4_ORENI	rps27a	ENSONIP00000035704	ENSONIP00000020250	NEDD4 E3 ubiquitin protein ligase a.	Ribosomal protein S27a.	0.850
I3JEG4_ORENI	uba52	ENSONIP00000035704	ENSONIP00000016035	NEDD4 E3 ubiquitin protein ligase a.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.767
LOC100692677	ENSONIP00000047919	ENSONIP00000059722	ENSONIP00000047919	Tyrosine-protein kinase.	Ubiquitin B.	0.478
LOC100692677	SRC	ENSONIP00000059722	ENSONIP00000008685	Tyrosine-protein kinase.	Tyrosine-protein kinase.	0.900
LOC100692677	rps27a	ENSONIP00000059722	ENSONIP00000020250	Tyrosine-protein kinase.	Ribosomal protein S27a.	0.435
LOC100692677	uba52	ENSONIP00000059722	ENSONIP00000016035	Tyrosine-protein kinase.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.432
LOC100694718	ENSONIP00000047919	ENSONIP00000056551	ENSONIP00000047919	E3 ubiquitin-protein ligase.	Ubiquitin B.	0.888
LOC100694718	LOC100697163	ENSONIP00000056551	ENSONIP00000011573	E3 ubiquitin-protein ligase.	E3 ubiquitin-protein ligase.	0.901
LOC100694718	LOC100701023	ENSONIP00000056551	ENSONIP00000004518	E3 ubiquitin-protein ligase.	WW domain containing E3 ubiquitin protein ligase 1.	0.663
LOC100694718	rps27a	ENSONIP00000056551	ENSONIP00000020250	E3 ubiquitin-protein ligase.	Ribosomal protein S27a.	0.922
LOC100694718	uba52	ENSONIP00000056551	ENSONIP00000016035	E3 ubiquitin-protein ligase.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.857