13 items (Oreochromis niloticus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	fbxo5	F-box protein 5. (432 aa)
	I3KQQ3_ORENI	Fizzy/cell division cycle 20 related 1b. (487 aa)
	cul1	Cullin 1b; Belongs to the cullin family. (1038 aa)
	kxd1	KxDL motif containing 1. (184 aa)
	uba52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
	FZR1	Fizzy/cell division cycle 20 related 1a. (496 aa)
	cdc20	Cell division cycle 20 homolog. (544 aa)
	FBXO43	F-box protein 43. (696 aa)
	skp1	S-phase kinase-associated protein 1; Belongs to the SKP1 family. (163 aa)
	LOC100694127	WD_REPEATS_REGION domain-containing protein. (489 aa)
	ENSONIP00000047919	Ubiquitin B. (354 aa)
	ENSONIP00000057827	Cell division cycle protein 20 homolog B isoform X1. (315 aa)
	rps27a	Ribosomal protein S27a. (156 aa)

Your Current Organism:

Oreochromis niloticus

NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSONIP00000047919	ENSONIP00000057827	ENSONIP00000047919	ENSONIP00000057827	Ubiquitin B.	Cell division cycle protein 20 homolog B isoform X1.	0.717
ENSONIP00000047919	FZR1	ENSONIP00000047919	ENSONIP00000012817	Ubiquitin B.	Fizzy/cell division cycle 20 related 1a.	0.701
ENSONIP00000047919	I3KQQ3_ORENI	ENSONIP00000047919	ENSONIP00000023448	Ubiquitin B.	Fizzy/cell division cycle 20 related 1b.	0.701
ENSONIP00000047919	LOC100694127	ENSONIP00000047919	ENSONIP00000071879	Ubiquitin B.	WD_REPEATS_REGION domain-containing protein.	0.701
ENSONIP00000047919	cdc20	ENSONIP00000047919	ENSONIP00000012385	Ubiquitin B.	Cell division cycle 20 homolog.	0.717
ENSONIP00000047919	cul1	ENSONIP00000047919	ENSONIP00000039419	Ubiquitin B.	Cullin 1b; Belongs to the cullin family.	0.874
ENSONIP00000047919	kxd1	ENSONIP00000047919	ENSONIP00000018629	Ubiquitin B.	KxDL motif containing 1.	0.717
ENSONIP00000047919	rps27a	ENSONIP00000047919	ENSONIP00000020250	Ubiquitin B.	Ribosomal protein S27a.	0.994
ENSONIP00000047919	skp1	ENSONIP00000047919	ENSONIP00000021777	Ubiquitin B.	S-phase kinase-associated protein 1; Belongs to the SKP1 family.	0.970
ENSONIP00000047919	uba52	ENSONIP00000047919	ENSONIP00000016035	Ubiquitin B.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.997
ENSONIP00000057827	ENSONIP00000047919	ENSONIP00000057827	ENSONIP00000047919	Cell division cycle protein 20 homolog B isoform X1.	Ubiquitin B.	0.717
ENSONIP00000057827	FBXO43	ENSONIP00000057827	ENSONIP00000008664	Cell division cycle protein 20 homolog B isoform X1.	F-box protein 43.	0.962
ENSONIP00000057827	FZR1	ENSONIP00000057827	ENSONIP00000012817	Cell division cycle protein 20 homolog B isoform X1.	Fizzy/cell division cycle 20 related 1a.	0.575
ENSONIP00000057827	I3KQQ3_ORENI	ENSONIP00000057827	ENSONIP00000023448	Cell division cycle protein 20 homolog B isoform X1.	Fizzy/cell division cycle 20 related 1b.	0.575
ENSONIP00000057827	LOC100694127	ENSONIP00000057827	ENSONIP00000071879	Cell division cycle protein 20 homolog B isoform X1.	WD_REPEATS_REGION domain-containing protein.	0.575
ENSONIP00000057827	cdc20	ENSONIP00000057827	ENSONIP00000012385	Cell division cycle protein 20 homolog B isoform X1.	Cell division cycle 20 homolog.	0.900
ENSONIP00000057827	cul1	ENSONIP00000057827	ENSONIP00000039419	Cell division cycle protein 20 homolog B isoform X1.	Cullin 1b; Belongs to the cullin family.	0.602
ENSONIP00000057827	fbxo5	ENSONIP00000057827	ENSONIP00000001406	Cell division cycle protein 20 homolog B isoform X1.	F-box protein 5.	0.955
ENSONIP00000057827	rps27a	ENSONIP00000057827	ENSONIP00000020250	Cell division cycle protein 20 homolog B isoform X1.	Ribosomal protein S27a.	0.625
ENSONIP00000057827	skp1	ENSONIP00000057827	ENSONIP00000021777	Cell division cycle protein 20 homolog B isoform X1.	S-phase kinase-associated protein 1; Belongs to the SKP1 family.	0.621