STRINGSTRING
LOC102075629 LOC102075629 I3JD82_ORENI I3JD82_ORENI ENSONIP00000077937 ENSONIP00000077937 LOC100710602 LOC100710602 ENSONIP00000047919 ENSONIP00000047919 LOC100695177 LOC100695177 arhgef18 arhgef18 TGFBR2 TGFBR2 LOC100703104 LOC100703104 LOC106098551 LOC106098551 rps27a rps27a LOC100698856 LOC100698856 LOC100712573 LOC100712573 uba52 uba52 I3K2K5_ORENI I3K2K5_ORENI cgn cgn LOC100694653 LOC100694653 LOC100703449 LOC100703449 PARD3 PARD3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC102075629Par-3 family cell polarity regulator beta b. (1201 aa)
I3JD82_ORENIF11 receptor, tandem duplicate 1. (320 aa)
ENSONIP00000077937Partitioning defective 3 homolog B isoform X1. (70 aa)
LOC100710602Cingulin b. (1200 aa)
ENSONIP00000047919Ubiquitin B. (354 aa)
LOC100695177Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (523 aa)
arhgef18Rho/rac guanine nucleotide exchange factor (GEF) 18b. (1644 aa)
TGFBR2TGF-beta receptor type-2; Transmembrane serine/threonine kinase forming with the TGF- beta type I serine/threonine kinase receptor, TGFBR1, the non- promiscuous receptor for the TGF-beta cytokines TGFB1, TGFB2 and TGFB3. Transduces the TGFB1, TGFB2 and TGFB3 signal from the cell surface to the cytoplasm and is thus regulating a plethora of physiological and pathological processes including cell cycle arrest in epithelial and hematopoietic cells, control of mesenchymal cell proliferation and differentiation, wound healing, extracellular matrix production, immunosuppression and carcinoge [...] (538 aa)
LOC100703104Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (599 aa)
LOC106098551Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (614 aa)
rps27aRibosomal protein S27a. (156 aa)
LOC100698856Par-3 family cell polarity regulator alpha, b. (1412 aa)
LOC100712573Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (637 aa)
uba52Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
I3K2K5_ORENIUncharacterized protein. (911 aa)
cgnCingulin a. (1202 aa)
LOC100694653Transforming growth factor beta; Belongs to the TGF-beta family. (381 aa)
LOC100703449Par-6 family cell polarity regulator alpha. (530 aa)
PARD3Par-3 family cell polarity regulator. (1376 aa)
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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