STRINGSTRING
LOC100693777 LOC100693777 snw1 snw1 atp1b4 atp1b4 LOC100700916 LOC100700916 trim33 trim33 ncor2 ncor2 uba52 uba52 ncor1 ncor1 smad3 smad3 LOC100710325 LOC100710325 rps27a rps27a LOC100703326 LOC100703326 ski ski ENSONIP00000047919 ENSONIP00000047919 LOC100708381 LOC100708381 LOC100705918 LOC100705918 LOC100705094 LOC100705094 SMAD3 SMAD3 nedd4l nedd4l LOC100700558 LOC100700558 I3KQQ1_ORENI I3KQQ1_ORENI parp1 parp1 LOC100697722 LOC100697722 usp9x usp9x mapk1 mapk1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC100693777Mothers against decapentaplegic homolog. (500 aa)
snw1SNW domain containing 1. (536 aa)
atp1b4Sodium/potassium-transporting ATPase subunit beta; This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. Belongs to the X(+)/potassium ATPases subunit beta family. (343 aa)
LOC100700916V-ski avian sarcoma viral oncogene homolog b. (687 aa)
trim33Tripartite motif containing 33. (1216 aa)
ncor2Nuclear receptor corepressor 2. (2362 aa)
uba52Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
ncor1Nuclear receptor corepressor 1. (2351 aa)
smad3Mothers against decapentaplegic homolog. (448 aa)
LOC100710325Mothers against decapentaplegic homolog. (467 aa)
rps27aRibosomal protein S27a. (156 aa)
LOC100703326Homeobox protein TGIF2. (578 aa)
skiV-ski avian sarcoma viral oncogene homolog a. (740 aa)
ENSONIP00000047919Ubiquitin B. (354 aa)
LOC100708381Mothers against decapentaplegic homolog. (526 aa)
LOC100705918TGFB-induced factor homeobox 1. (330 aa)
LOC100705094Mothers against decapentaplegic homolog. (765 aa)
SMAD3Mothers against decapentaplegic homolog. (425 aa)
nedd4lNEDD4 like E3 ubiquitin protein ligase. (1289 aa)
LOC100700558Mothers against decapentaplegic homolog. (550 aa)
I3KQQ1_ORENISKI-like proto-oncogene a. (655 aa)
parp1Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair. (1023 aa)
LOC100697722Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (398 aa)
usp9xUbiquitin specific peptidase 9; Belongs to the peptidase C19 family. (2612 aa)
mapk1Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (369 aa)
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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