STRINGSTRING
ccnk ccnk rbl1 rbl1 LOC100705578 LOC100705578 rnf111 rnf111 smad7 smad7 cdk19 cdk19 LOC100709139 LOC100709139 cdk9 cdk9 uba52 uba52 cdk8 cdk8 tfdp1 tfdp1 kxd1 kxd1 smad3 smad3 LOC100710325 LOC100710325 rps27a rps27a LOC100707881 LOC100707881 men1 men1 ccnq ccnq e2f4 e2f4 I3KZC4_ORENI I3KZC4_ORENI LOC100698210 LOC100698210 ENSONIP00000047919 ENSONIP00000047919 LOC100708381 LOC100708381 LOC100690070 LOC100690070 ccnc ccnc LOC100705046 LOC100705046 furin furin sp1 sp1 LOC100705094 LOC100705094 SMAD3 SMAD3 LOC100700558 LOC100700558 LOC100697722 LOC100697722 mapk1 mapk1 LOC100693777 LOC100693777
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ccnkCyclin K; Belongs to the cyclin family. (550 aa)
rbl1Retinoblastoma-like 1 (p107). (1064 aa)
LOC100705578E2F_TDP domain-containing protein. (79 aa)
rnf111Ring finger protein 111. (1006 aa)
smad7Mothers against decapentaplegic homolog. (376 aa)
cdk19Cyclin-dependent kinase 19; Belongs to the protein kinase superfamily. (492 aa)
LOC100709139Cyclin T2b; Belongs to the cyclin family. (610 aa)
cdk9Cyclin-dependent kinase 9 (CDC2-related kinase); Belongs to the protein kinase superfamily. (393 aa)
uba52Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
cdk8Cyclin-dependent kinase 8; Belongs to the protein kinase superfamily. (475 aa)
tfdp1Transcription factor. (413 aa)
kxd1KxDL motif containing 1. (184 aa)
smad3Mothers against decapentaplegic homolog. (448 aa)
LOC100710325Mothers against decapentaplegic homolog. (467 aa)
rps27aRibosomal protein S27a. (156 aa)
LOC100707881JunB proto-oncogene, AP-1 transcription factor subunit b. (329 aa)
men1Multiple endocrine neoplasia I. (629 aa)
ccnqCyclin Q; Belongs to the cyclin family. (211 aa)
e2f4E2F transcription factor 4. (407 aa)
I3KZC4_ORENIJunB proto-oncogene, AP-1 transcription factor subunit a. (300 aa)
LOC100698210Cyclin T2; Belongs to the cyclin family. (708 aa)
ENSONIP00000047919Ubiquitin B. (354 aa)
LOC100708381Mothers against decapentaplegic homolog. (526 aa)
LOC100690070Cyclin T1; Belongs to the cyclin family. (702 aa)
ccncCyclin C; Belongs to the cyclin family. (353 aa)
LOC100705046Furin (paired basic amino acid cleaving enzyme) a; Belongs to the peptidase S8 family. (812 aa)
furinFurin (paired basic amino acid cleaving enzyme) b; Belongs to the peptidase S8 family. (843 aa)
sp1Sp1 transcription factor. (726 aa)
LOC100705094Mothers against decapentaplegic homolog. (765 aa)
SMAD3Mothers against decapentaplegic homolog. (425 aa)
LOC100700558Mothers against decapentaplegic homolog. (550 aa)
LOC100697722Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (398 aa)
mapk1Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (369 aa)
LOC100693777Mothers against decapentaplegic homolog. (500 aa)
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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