10 items (Oreochromis niloticus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Trim32	Tripartite motif containing 32. (681 aa)
	uba52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
	rps27a	Ribosomal protein S27a. (156 aa)
	LOC100702954	Interferon regulatory factor 3. (466 aa)
	LOC100690969	Deltex 4, E3 ubiquitin ligase a. (806 aa)
	tbk1	TANK-binding kinase 1. (746 aa)
	sting1	Stimulator of interferon genes protein. (403 aa)
	LOC100694715	Uncharacterized protein. (789 aa)
	ENSONIP00000047919	Ubiquitin B. (354 aa)
	DDX41	DEAD-box helicase 41. (614 aa)

Your Current Organism:

Oreochromis niloticus

NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DDX41	ENSONIP00000047919	ENSONIP00000069776	ENSONIP00000047919	DEAD-box helicase 41.	Ubiquitin B.	0.599
DDX41	LOC100702954	ENSONIP00000069776	ENSONIP00000025281	DEAD-box helicase 41.	Interferon regulatory factor 3.	0.578
DDX41	sting1	ENSONIP00000069776	ENSONIP00000040170	DEAD-box helicase 41.	Stimulator of interferon genes protein.	0.608
DDX41	tbk1	ENSONIP00000069776	ENSONIP00000037971	DEAD-box helicase 41.	TANK-binding kinase 1.	0.450
ENSONIP00000047919	DDX41	ENSONIP00000047919	ENSONIP00000069776	Ubiquitin B.	DEAD-box helicase 41.	0.599
ENSONIP00000047919	LOC100690969	ENSONIP00000047919	ENSONIP00000029603	Ubiquitin B.	Deltex 4, E3 ubiquitin ligase a.	0.551
ENSONIP00000047919	LOC100694715	ENSONIP00000047919	ENSONIP00000041180	Ubiquitin B.	Uncharacterized protein.	0.551
ENSONIP00000047919	LOC100702954	ENSONIP00000047919	ENSONIP00000025281	Ubiquitin B.	Interferon regulatory factor 3.	0.506
ENSONIP00000047919	Trim32	ENSONIP00000047919	ENSONIP00000026301	Ubiquitin B.	Tripartite motif containing 32.	0.569
ENSONIP00000047919	rps27a	ENSONIP00000047919	ENSONIP00000020250	Ubiquitin B.	Ribosomal protein S27a.	0.994
ENSONIP00000047919	sting1	ENSONIP00000047919	ENSONIP00000040170	Ubiquitin B.	Stimulator of interferon genes protein.	0.649
ENSONIP00000047919	tbk1	ENSONIP00000047919	ENSONIP00000037971	Ubiquitin B.	TANK-binding kinase 1.	0.644
ENSONIP00000047919	uba52	ENSONIP00000047919	ENSONIP00000016035	Ubiquitin B.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.997
LOC100690969	ENSONIP00000047919	ENSONIP00000029603	ENSONIP00000047919	Deltex 4, E3 ubiquitin ligase a.	Ubiquitin B.	0.551
LOC100690969	rps27a	ENSONIP00000029603	ENSONIP00000020250	Deltex 4, E3 ubiquitin ligase a.	Ribosomal protein S27a.	0.585
LOC100690969	uba52	ENSONIP00000029603	ENSONIP00000016035	Deltex 4, E3 ubiquitin ligase a.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.470
LOC100694715	ENSONIP00000047919	ENSONIP00000041180	ENSONIP00000047919	Uncharacterized protein.	Ubiquitin B.	0.551
LOC100694715	rps27a	ENSONIP00000041180	ENSONIP00000020250	Uncharacterized protein.	Ribosomal protein S27a.	0.585
LOC100694715	uba52	ENSONIP00000041180	ENSONIP00000016035	Uncharacterized protein.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.470
LOC100702954	DDX41	ENSONIP00000025281	ENSONIP00000069776	Interferon regulatory factor 3.	DEAD-box helicase 41.	0.578