44 items (Oreochromis niloticus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	nup107	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (920 aa)
	aaas	Achalasia, adrenocortical insufficiency, alacrimia. (520 aa)
	LOC100694797	Translocated promoter region a, nuclear basket protein. (2505 aa)
	I3IUD3_ORENI	Uncharacterized protein. (500 aa)
	nup160	Nucleoporin 160. (1399 aa)
	nup85	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (652 aa)
	LOC100690637	Small ubiquitin-related modifier. (94 aa)
	seh1l	SEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family. (415 aa)
	nup42	Nucleoporin 42. (439 aa)
	LOC100692890	RAN binding protein 2. (3035 aa)
	nup37	Nucleoporin 37. (325 aa)
	nup50	Nucleoporin 50. (468 aa)
	nup62	Nsp1_C domain-containing protein. (559 aa)
	tpr	Translocated promoter region b, nuclear basket protein. (2364 aa)
	LOC100699507	RING-type domain-containing protein. (1570 aa)
	nup155	Nucleoporin 155. (1365 aa)
	nup35	Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (294 aa)
	LOC100694815	Protein FAM111A. (639 aa)
	LOC102079550	Protein FAM111A-like. (623 aa)
	nup210	Nucleoporin 210. (1886 aa)
	nup93	Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (820 aa)
	topors	Topoisomerase I binding, arginine/serine-rich a. (695 aa)
	rae1	Ribonucleic acid export 1. (398 aa)
	ENSONIP00000028865	annotation not available (501 aa)
	ENSONIP00000028580	annotation not available (83 aa)
	Sec13	SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family. (326 aa)
	LOC102077867	Uncharacterized protein. (671 aa)
	nup58	Nucleoporin 58. (599 aa)
	sumo1	Small ubiquitin-related modifier. (101 aa)
	LOC100709166	Small ubiquitin-related modifier. (94 aa)
	nup133	Nucleoporin 133. (1135 aa)
	ube2i	Ubiquitin-conjugating enzyme E2Ib; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
	LOC109195020	Protein FAM111A-like. (500 aa)
	ranbp3	RAN binding protein 3b. (505 aa)
	ENSONIP00000064374	Small ubiquitin-related modifier 2. (90 aa)
	sumo2	Small ubiquitin-related modifier. (95 aa)
	ENSONIP00000061996	annotation not available (157 aa)
	pias4	Protein inhibitor of activated STAT, 4a. (507 aa)
	nup43	Nucleoporin 43. (372 aa)
	nup188	Nucleoporin 188. (1746 aa)
	nup88	Nucleoporin 88. (719 aa)
	ndc1	NDC1 transmembrane nucleoporin. (666 aa)
	kctd2	Potassium channel tetramerization domain containing 2. (273 aa)
	LOC100696737	POM121 transmembrane nucleoporin. (1177 aa)

Your Current Organism:

Oreochromis niloticus

NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSONIP00000028580	ENSONIP00000061996	ENSONIP00000028580	ENSONIP00000061996	annotation not available	annotation not available	0.602
ENSONIP00000028580	ENSONIP00000064374	ENSONIP00000028580	ENSONIP00000064374	annotation not available	Small ubiquitin-related modifier 2.	0.534
ENSONIP00000028580	LOC100690637	ENSONIP00000028580	ENSONIP00000037316	annotation not available	Small ubiquitin-related modifier.	0.534
ENSONIP00000028580	LOC100692890	ENSONIP00000028580	ENSONIP00000049343	annotation not available	RAN binding protein 2.	0.999
ENSONIP00000028580	LOC100694797	ENSONIP00000028580	ENSONIP00000020894	annotation not available	Translocated promoter region a, nuclear basket protein.	0.796
ENSONIP00000028580	LOC100696737	ENSONIP00000028580	ENSONIP00000021912	annotation not available	POM121 transmembrane nucleoporin.	0.652
ENSONIP00000028580	LOC100709166	ENSONIP00000028580	ENSONIP00000068525	annotation not available	Small ubiquitin-related modifier.	0.534
ENSONIP00000028580	Sec13	ENSONIP00000028580	ENSONIP00000081501	annotation not available	SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family.	0.969
ENSONIP00000028580	aaas	ENSONIP00000028580	ENSONIP00000021463	annotation not available	Achalasia, adrenocortical insufficiency, alacrimia.	0.920
ENSONIP00000028580	kctd2	ENSONIP00000028580	ENSONIP00000022883	annotation not available	Potassium channel tetramerization domain containing 2.	0.602
ENSONIP00000028580	ndc1	ENSONIP00000028580	ENSONIP00000023352	annotation not available	NDC1 transmembrane nucleoporin.	0.967
ENSONIP00000028580	nup107	ENSONIP00000028580	ENSONIP00000022679	annotation not available	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.977
ENSONIP00000028580	nup133	ENSONIP00000028580	ENSONIP00000067094	annotation not available	Nucleoporin 133.	0.976
ENSONIP00000028580	nup155	ENSONIP00000028580	ENSONIP00000017656	annotation not available	Nucleoporin 155.	0.977
ENSONIP00000028580	nup160	ENSONIP00000028580	ENSONIP00000061574	annotation not available	Nucleoporin 160.	0.950
ENSONIP00000028580	nup188	ENSONIP00000028580	ENSONIP00000009316	annotation not available	Nucleoporin 188.	0.973
ENSONIP00000028580	nup210	ENSONIP00000028580	ENSONIP00000056548	annotation not available	Nucleoporin 210.	0.899
ENSONIP00000028580	nup35	ENSONIP00000028580	ENSONIP00000020459	annotation not available	Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family.	0.971
ENSONIP00000028580	nup43	ENSONIP00000028580	ENSONIP00000007005	annotation not available	Nucleoporin 43.	0.953
ENSONIP00000028580	nup50	ENSONIP00000028580	ENSONIP00000009445	annotation not available	Nucleoporin 50.	0.809