STRINGSTRING
nup93 nup93 nup58 nup58 sumo1 sumo1 pcna pcna rangap1 rangap1 LOC100709166 LOC100709166 LOC100692112 LOC100692112 nup133 nup133 ube2i ube2i ENSONIP00000064374 ENSONIP00000064374 sumo2 sumo2 ENSONIP00000061996 ENSONIP00000061996 pias4 pias4 nup160 nup160 rae1 rae1 LOC100706117 LOC100706117 nup210 nup210 LOC100698382 LOC100698382 NUP54 NUP54 nup37 nup37 LOC100692890 LOC100692890 nup42 nup42 seh1l seh1l LOC100690637 LOC100690637 nup85 nup85 Top2b Top2b LOC109202395 LOC109202395 ENSONIP00000028580 ENSONIP00000028580 nup88 nup88 LOC100697672 LOC100697672 top2a top2a LOC100709661 LOC100709661 LOC100700062 LOC100700062 ndc1 ndc1 kctd2 kctd2 nup107 nup107 LOC100696737 LOC100696737 nup50 nup50 nup62 nup62 tpr tpr LOC100710935 LOC100710935 nup205 nup205 LOC100709346 LOC100709346 cdca8 cdca8 nup155 nup155 NUP214 NUP214 pias1 pias1 incenp incenp nup35 nup35 LOC100694797 LOC100694797 aaas aaas nup153 nup153 nup43 nup43 nup188 nup188
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
nup93Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (820 aa)
nup58Nucleoporin 58. (599 aa)
sumo1Small ubiquitin-related modifier. (101 aa)
pcnaProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
rangap1RAN GTPase activating protein 1a. (582 aa)
LOC100709166Small ubiquitin-related modifier. (94 aa)
LOC100692112Protein inhibitor of activated STAT, 1a. (722 aa)
nup133Nucleoporin 133. (1135 aa)
ube2iUbiquitin-conjugating enzyme E2Ib; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
ENSONIP00000064374Small ubiquitin-related modifier 2. (90 aa)
sumo2Small ubiquitin-related modifier. (95 aa)
ENSONIP00000061996annotation not available (157 aa)
pias4Protein inhibitor of activated STAT, 4a. (507 aa)
nup160Nucleoporin 160. (1399 aa)
rae1Ribonucleic acid export 1. (398 aa)
LOC100706117Aurora kinase B; Belongs to the protein kinase superfamily. (290 aa)
nup210Nucleoporin 210. (1886 aa)
LOC100698382DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] (720 aa)
NUP54Nucleoporin 54. (621 aa)
nup37Nucleoporin 37. (325 aa)
LOC100692890RAN binding protein 2. (3035 aa)
nup42Nucleoporin 42. (439 aa)
seh1lSEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family. (415 aa)
LOC100690637Small ubiquitin-related modifier. (94 aa)
nup85Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (652 aa)
Top2bDNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (1568 aa)
LOC109202395Small ubiquitin-related modifier 2. (145 aa)
ENSONIP00000028580annotation not available (83 aa)
nup88Nucleoporin 88. (719 aa)
LOC100697672DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] (756 aa)
top2aDNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (1584 aa)
LOC100709661Baculoviral IAP repeat containing 5a. (142 aa)
LOC100700062Ran GTPase activating protein 1b. (577 aa)
ndc1NDC1 transmembrane nucleoporin. (666 aa)
kctd2Potassium channel tetramerization domain containing 2. (273 aa)
nup107Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (920 aa)
LOC100696737POM121 transmembrane nucleoporin. (1177 aa)
nup50Nucleoporin 50. (468 aa)
nup62Nsp1_C domain-containing protein. (559 aa)
tprTranslocated promoter region b, nuclear basket protein. (2364 aa)
LOC100710935DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] (747 aa)
nup205Nucleoporin 205. (1992 aa)
LOC100709346Baculoviral IAP repeat containing 5b. (144 aa)
cdca8Cell division cycle associated 8. (279 aa)
nup155Nucleoporin 155. (1365 aa)
NUP214Nucleoporin 214. (1690 aa)
pias1Protein inhibitor of activated STAT, 1b. (657 aa)
incenpUncharacterized protein. (778 aa)
nup35Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (294 aa)
LOC100694797Translocated promoter region a, nuclear basket protein. (2505 aa)
aaasAchalasia, adrenocortical insufficiency, alacrimia. (520 aa)
nup153Nucleoporin 153. (1529 aa)
nup43Nucleoporin 43. (372 aa)
nup188Nucleoporin 188. (1746 aa)
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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