45 items (Oreochromis niloticus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	uggt1	UDP-glucose glycoprotein glucosyltransferase 1. (1582 aa)
	LOC100701980	Calreticulin. (430 aa)
	amfr	Autocrine motility factor receptor b. (624 aa)
	marchf7	Membrane-associated ring finger (C3HC4) 7. (799 aa)
	LOC100692227	RING-CH-type domain-containing protein. (248 aa)
	LOC100706542	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (858 aa)
	edem3	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (901 aa)
	ubxn1	UBX domain protein 1. (311 aa)
	ganab	Glucosidase, alpha; neutral AB; Belongs to the glycosyl hydrolase 31 family. (951 aa)
	engase	Endo-beta-N-acetylglucosaminidase. (708 aa)
	derl1	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. (252 aa)
	LOC100711757	Calreticulin. (422 aa)
	marchf4	Membrane-associated ring finger (C3HC4) 4. (400 aa)
	LOC100702058	RING-CH-type domain-containing protein. (248 aa)
	uba52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
	LOC100700979	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (685 aa)
	spata5l1	Spermatogenesis associated 5-like 1. (748 aa)
	MARCHF6	Membrane associated ring-CH-type finger 6. (915 aa)
	Pdia4	Protein disulfide-isomerase A4; Belongs to the protein disulfide isomerase family. (639 aa)
	kxd1	KxDL motif containing 1. (184 aa)
	RAD23B	RAD23 homolog B, nucleotide excision repair protein. (369 aa)
	rps27a	Ribosomal protein S27a. (156 aa)
	I3KI96_ORENI	Membrane-associated ring finger (C3HC4) 9. (360 aa)
	rnf103	Ring finger protein 103. (700 aa)
	mogs	Mannosyl-oligosaccharide glucosidase. (844 aa)
	MARCHF9	Membrane associated ring-CH-type finger 9. (338 aa)
	I3KBP7_ORENI	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (543 aa)
	LOC100691461	Calmegin. (671 aa)
	marchf2	Membrane-associated ring finger (C3HC4) 2. (253 aa)
	Uggt2	UDP-glucose glycoprotein glucosyltransferase 2. (1490 aa)
	marchf8	Membrane-associated ring finger (C3HC4) 8. (282 aa)
	rnf139	Ring finger protein 139. (704 aa)
	ENSONIP00000047919	Ubiquitin B. (354 aa)
	vcp	Valosin containing protein; Belongs to the AAA ATPase family. (816 aa)
	ngly1	Peptide-N(4)-(N-acetyl-beta- glucosaminyl)asparagine amidase. (637 aa)
	marchf11	Membrane-associated ring finger (C3HC4) 11. (349 aa)
	edem1	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (647 aa)
	LOC100700920	Chromodomain-helicase-DNA-binding protein Mi-2 homolog. (559 aa)
	canx	Calnexin. (609 aa)
	pdia3	Protein disulfide-isomerase. (502 aa)
	SPATA5	Spermatogenesis associated 5. (900 aa)
	LOC100704618	Calreticulin. (429 aa)
	LOC100702196	Zgc:136908; Belongs to the AAA ATPase family. (826 aa)
	psmc1	Proteasome 26S subunit, ATPase 1b; Belongs to the AAA ATPase family. (474 aa)
	LOC100690953	RING-CH-type domain-containing protein. (927 aa)

Your Current Organism:

Oreochromis niloticus

NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSONIP00000047919	LOC100702196	ENSONIP00000047919	ENSONIP00000075385	Ubiquitin B.	Zgc:136908; Belongs to the AAA ATPase family.	0.888
ENSONIP00000047919	RAD23B	ENSONIP00000047919	ENSONIP00000018833	Ubiquitin B.	RAD23 homolog B, nucleotide excision repair protein.	0.935
ENSONIP00000047919	SPATA5	ENSONIP00000047919	ENSONIP00000071571	Ubiquitin B.	Spermatogenesis associated 5.	0.881
ENSONIP00000047919	amfr	ENSONIP00000047919	ENSONIP00000003079	Ubiquitin B.	Autocrine motility factor receptor b.	0.938
ENSONIP00000047919	derl1	ENSONIP00000047919	ENSONIP00000009190	Ubiquitin B.	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	0.661
ENSONIP00000047919	engase	ENSONIP00000047919	ENSONIP00000007842	Ubiquitin B.	Endo-beta-N-acetylglucosaminidase.	0.659
ENSONIP00000047919	kxd1	ENSONIP00000047919	ENSONIP00000018629	Ubiquitin B.	KxDL motif containing 1.	0.717
ENSONIP00000047919	ngly1	ENSONIP00000047919	ENSONIP00000055777	Ubiquitin B.	Peptide-N(4)-(N-acetyl-beta- glucosaminyl)asparagine amidase.	0.833
ENSONIP00000047919	psmc1	ENSONIP00000047919	ENSONIP00000075424	Ubiquitin B.	Proteasome 26S subunit, ATPase 1b; Belongs to the AAA ATPase family.	0.949
ENSONIP00000047919	rnf139	ENSONIP00000047919	ENSONIP00000047657	Ubiquitin B.	Ring finger protein 139.	0.421
ENSONIP00000047919	rps27a	ENSONIP00000047919	ENSONIP00000020250	Ubiquitin B.	Ribosomal protein S27a.	0.994
ENSONIP00000047919	spata5l1	ENSONIP00000047919	ENSONIP00000016753	Ubiquitin B.	Spermatogenesis associated 5-like 1.	0.881
ENSONIP00000047919	uba52	ENSONIP00000047919	ENSONIP00000016035	Ubiquitin B.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.997
ENSONIP00000047919	ubxn1	ENSONIP00000047919	ENSONIP00000006654	Ubiquitin B.	UBX domain protein 1.	0.832
ENSONIP00000047919	vcp	ENSONIP00000047919	ENSONIP00000048463	Ubiquitin B.	Valosin containing protein; Belongs to the AAA ATPase family.	0.888
I3KBP7_ORENI	LOC100691461	ENSONIP00000029911	ENSONIP00000032586	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	Calmegin.	0.595
I3KBP7_ORENI	Pdia4	ENSONIP00000029911	ENSONIP00000018127	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	Protein disulfide-isomerase A4; Belongs to the protein disulfide isomerase family.	0.497
I3KBP7_ORENI	Uggt2	ENSONIP00000029911	ENSONIP00000038662	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	UDP-glucose glycoprotein glucosyltransferase 2.	0.516
I3KBP7_ORENI	amfr	ENSONIP00000029911	ENSONIP00000003079	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	Autocrine motility factor receptor b.	0.432
I3KBP7_ORENI	canx	ENSONIP00000029911	ENSONIP00000067870	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	Calnexin.	0.595