16 items (Oreochromis niloticus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	aspdh	Aspartate dehydrogenase domain containing. (297 aa)
	LOC100702196	Zgc:136908; Belongs to the AAA ATPase family. (826 aa)
	SPATA5	Spermatogenesis associated 5. (900 aa)
	vcp	Valosin containing protein; Belongs to the AAA ATPase family. (816 aa)
	ENSONIP00000047919	Ubiquitin B. (354 aa)
	I3JLC5_ORENI	Uncharacterized protein. (506 aa)
	LOC100700586	Ataxin 3. (348 aa)
	josd1	Josephin domain containing 1. (266 aa)
	rps27a	Ribosomal protein S27a. (156 aa)
	RAD23B	RAD23 homolog B, nucleotide excision repair protein. (369 aa)
	kxd1	KxDL motif containing 1. (184 aa)
	spata5l1	Spermatogenesis associated 5-like 1. (748 aa)
	josd2	Josephin domain containing 2. (183 aa)
	uba52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
	Prkn	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. (441 aa)
	rad23a	RAD23 homolog A, nucleotide excision repair protein a. (365 aa)

Your Current Organism:

Oreochromis niloticus

NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSONIP00000047919	I3JLC5_ORENI	ENSONIP00000047919	ENSONIP00000032184	Ubiquitin B.	Uncharacterized protein.	0.935
ENSONIP00000047919	LOC100700586	ENSONIP00000047919	ENSONIP00000025381	Ubiquitin B.	Ataxin 3.	0.935
ENSONIP00000047919	LOC100702196	ENSONIP00000047919	ENSONIP00000075385	Ubiquitin B.	Zgc:136908; Belongs to the AAA ATPase family.	0.888
ENSONIP00000047919	Prkn	ENSONIP00000047919	ENSONIP00000009000	Ubiquitin B.	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily.	0.962
ENSONIP00000047919	RAD23B	ENSONIP00000047919	ENSONIP00000018833	Ubiquitin B.	RAD23 homolog B, nucleotide excision repair protein.	0.935
ENSONIP00000047919	SPATA5	ENSONIP00000047919	ENSONIP00000071571	Ubiquitin B.	Spermatogenesis associated 5.	0.881
ENSONIP00000047919	josd1	ENSONIP00000047919	ENSONIP00000024806	Ubiquitin B.	Josephin domain containing 1.	0.813
ENSONIP00000047919	josd2	ENSONIP00000047919	ENSONIP00000016080	Ubiquitin B.	Josephin domain containing 2.	0.924
ENSONIP00000047919	kxd1	ENSONIP00000047919	ENSONIP00000018629	Ubiquitin B.	KxDL motif containing 1.	0.717
ENSONIP00000047919	rad23a	ENSONIP00000047919	ENSONIP00000008291	Ubiquitin B.	RAD23 homolog A, nucleotide excision repair protein a.	0.935
ENSONIP00000047919	rps27a	ENSONIP00000047919	ENSONIP00000020250	Ubiquitin B.	Ribosomal protein S27a.	0.994
ENSONIP00000047919	spata5l1	ENSONIP00000047919	ENSONIP00000016753	Ubiquitin B.	Spermatogenesis associated 5-like 1.	0.881
ENSONIP00000047919	uba52	ENSONIP00000047919	ENSONIP00000016035	Ubiquitin B.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.997
ENSONIP00000047919	vcp	ENSONIP00000047919	ENSONIP00000048463	Ubiquitin B.	Valosin containing protein; Belongs to the AAA ATPase family.	0.888
I3JLC5_ORENI	ENSONIP00000047919	ENSONIP00000032184	ENSONIP00000047919	Uncharacterized protein.	Ubiquitin B.	0.935
I3JLC5_ORENI	LOC100700586	ENSONIP00000032184	ENSONIP00000025381	Uncharacterized protein.	Ataxin 3.	0.836
I3JLC5_ORENI	LOC100702196	ENSONIP00000032184	ENSONIP00000075385	Uncharacterized protein.	Zgc:136908; Belongs to the AAA ATPase family.	0.697
I3JLC5_ORENI	Prkn	ENSONIP00000032184	ENSONIP00000009000	Uncharacterized protein.	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily.	0.740
I3JLC5_ORENI	SPATA5	ENSONIP00000032184	ENSONIP00000071571	Uncharacterized protein.	Spermatogenesis associated 5.	0.697
I3JLC5_ORENI	josd1	ENSONIP00000032184	ENSONIP00000024806	Uncharacterized protein.	Josephin domain containing 1.	0.539