STRINGSTRING
gatad2b gatad2b tbpl1 tbpl1 LOC100694214 LOC100694214 ercc3 ercc3 gtf2h4 gtf2h4 LOC100704896 LOC100704896 taf1a taf1a LOC100705962 LOC100705962 ENSONIP00000009463 ENSONIP00000009463 ercc2 ercc2 polr1e polr1e LOC100698867 LOC100698867 LOC100696317 LOC100696317 ercc6 ercc6 ENSONIP00000012427 ENSONIP00000012427 LOC100705552 LOC100705552 LOC100698109 LOC100698109 LOC100696048 LOC100696048 LOC100694821 LOC100694821 rrn3 rrn3 LOC100708236 LOC100708236 chd4 chd4 gtf2h3 gtf2h3 I3JKL2_ORENI I3JKL2_ORENI LOC100690811 LOC100690811 LOC100690020 LOC100690020 taf1b taf1b LOC100691280 LOC100691280 mnat1 mnat1 LOC100691120 LOC100691120 LOC109203640 LOC109203640 I3JUG4_ORENI I3JUG4_ORENI ENSONIP00000031433 ENSONIP00000031433 mta2 mta2 ENSONIP00000032037 ENSONIP00000032037 ENSONIP00000032574 ENSONIP00000032574 ENSONIP00000033105 ENSONIP00000033105 ENSONIP00000033757 ENSONIP00000033757 LOC100691280-2 LOC100691280-2 ENSONIP00000036217 ENSONIP00000036217 POLR2E POLR2E taf1c taf1c LOC100691280-3 LOC100691280-3 LOC100706337 LOC100706337 ENSONIP00000038175 ENSONIP00000038175 LOC100706645 LOC100706645 ccnh ccnh LOC100701651 LOC100701651 ENSONIP00000040408 ENSONIP00000040408 ENSONIP00000041282 ENSONIP00000041282 ENSONIP00000042374 ENSONIP00000042374 ENSONIP00000044860 ENSONIP00000044860 LOC100696254 LOC100696254 LOC100710892 LOC100710892 Twistnb Twistnb chd5 chd5 LOC100694248 LOC100694248 I3KSC7_ORENI I3KSC7_ORENI Mta1 Mta1 ENSONIP00000052961 ENSONIP00000052961 ENSONIP00000054389 ENSONIP00000054389 ENSONIP00000055565 ENSONIP00000055565 polr2h polr2h cdk7 cdk7 ENSONIP00000061482 ENSONIP00000061482 gtf2h1 gtf2h1 ENSONIP00000061752 ENSONIP00000061752 ENSONIP00000061932 ENSONIP00000061932 LOC100693699 LOC100693699 LOC100694115 LOC100694115 ENSONIP00000063402 ENSONIP00000063402 polr1b polr1b znrd1 znrd1 ubtf ubtf polr2f polr2f ENSONIP00000064303 ENSONIP00000064303 ENSONIP00000064548 ENSONIP00000064548 ENSONIP00000064706 ENSONIP00000064706 LOC100701661 LOC100701661 gtf2h5 gtf2h5 LOC100689862 LOC100689862 I3KFX5_ORENI I3KFX5_ORENI Polr1c Polr1c I3L053_ORENI I3L053_ORENI ENSONIP00000067435 ENSONIP00000067435 ENSONIP00000067847 ENSONIP00000067847 LOC100711479 LOC100711479 ENSONIP00000070717 ENSONIP00000070717 ENSONIP00000071258 ENSONIP00000071258 ENSONIP00000073260 ENSONIP00000073260 ENSONIP00000073881 ENSONIP00000073881 LOC100689862-2 LOC100689862-2 ENSONIP00000077839 ENSONIP00000077839 polr2l polr2l LOC100695351 LOC100695351 ENSONIP00000079413 ENSONIP00000079413 H3-3B H3-3B tbp tbp polr2k polr2k ENSONIP00000081065 ENSONIP00000081065
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
gatad2bGATA zinc finger domain containing 2B. (653 aa)
tbpl1TBP-like 1. (187 aa)
LOC100694214GATA zinc finger domain containing 2Ab. (649 aa)
ercc3Excision repair cross-complementation group 3. (802 aa)
gtf2h4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (479 aa)
LOC100704896Histone H2A; Belongs to the histone H2A family. (220 aa)
taf1aTATA box binding protein (TBP)-associated factor, RNA polymerase I, A. (437 aa)
LOC100705962Chromodomain helicase DNA binding protein 4a. (1970 aa)
ENSONIP00000009463annotation not available (67 aa)
ercc2Excision repair cross-complementation group 2. (760 aa)
polr1eRNA polymerase I subunit E. (420 aa)
LOC100698867Chromodomain helicase DNA binding protein 3. (1822 aa)
LOC100696317Histone H2B; Belongs to the histone H2B family. (116 aa)
ercc6Excision repair cross-complementation group 6. (1437 aa)
ENSONIP00000012427Autoimmune regulator. (369 aa)
LOC100705552GATA zinc finger domain containing 2A. (735 aa)
LOC100698109Methyl-CpG binding domain protein 3. (239 aa)
LOC100696048General transcription factor IIH subunit. (392 aa)
LOC100694821TATA box binding protein like 2. (313 aa)
rrn3RRN3 homolog, RNA polymerase I transcription factor. (631 aa)
LOC100708236Methyl-CpG binding domain protein 2. (266 aa)
chd4Uncharacterized protein. (1977 aa)
gtf2h3General transcription factor IIH, polypeptide 3. (303 aa)
I3JKL2_ORENIHistone H2B; Belongs to the histone H2B family. (249 aa)
LOC100690811Uncharacterized protein. (450 aa)
LOC100690020Germ cell nuclear acidic peptidase. (530 aa)
taf1bTATA box binding protein (Tbp)-associated factor, RNA polymerase I, B. (643 aa)
LOC100691280Histone H3; Belongs to the histone H3 family. (136 aa)
mnat1CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (311 aa)
LOC100691120Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
LOC109203640Histone H2A; Belongs to the histone H2A family. (166 aa)
I3JUG4_ORENICyclin D binding myb-like transcription factor 1. (604 aa)
ENSONIP00000031433annotation not available (102 aa)
mta2Metastasis associated 1 family, member 2. (667 aa)
ENSONIP00000032037annotation not available (102 aa)
ENSONIP00000032574annotation not available (129 aa)
ENSONIP00000033105Si:ch73-368j24.1. (97 aa)
ENSONIP00000033757CD3e molecule, epsilon associated protein. (322 aa)
LOC100691280-2Histone H3.3. (136 aa)
ENSONIP00000036217Histone H3. (165 aa)
POLR2ERNA polymerase II subunit E. (249 aa)
taf1cTATA box-binding protein-associated factor RNA polymerase I subunit C. (1076 aa)
LOC100691280-3Histone H3.3. (136 aa)
LOC100706337WD_REPEATS_REGION domain-containing protein. (441 aa)
ENSONIP00000038175annotation not available (88 aa)
LOC100706645Histone H2A; Belongs to the histone H2A family. (128 aa)
ccnhCyclin H; Belongs to the cyclin family. (325 aa)
LOC100701651Histone H2A; Belongs to the histone H2A family. (150 aa)
ENSONIP00000040408annotation not available (127 aa)
ENSONIP00000041282annotation not available (113 aa)
ENSONIP00000042374annotation not available (113 aa)
ENSONIP00000044860annotation not available (113 aa)
LOC100696254Metastasis associated 1 family, member 3. (700 aa)
LOC100710892Upstream binding transcription factor, like. (700 aa)
TwistnbUncharacterized protein. (422 aa)
chd5Chromodomain helicase DNA binding protein 5. (2000 aa)
LOC100694248Chromobox homolog 3a (HP1 gamma homolog, Drosophila). (185 aa)
I3KSC7_ORENIUncharacterized protein. (151 aa)
Mta1Metastasis associated 1. (764 aa)
ENSONIP00000052961annotation not available (113 aa)
ENSONIP00000054389annotation not available (657 aa)
ENSONIP00000055565annotation not available (93 aa)
polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
cdk7Cyclin-dependent kinase 7; Belongs to the protein kinase superfamily. (347 aa)
ENSONIP00000061482Zgc:163040. (105 aa)
gtf2h1General transcription factor IIH, polypeptide 1. (556 aa)
ENSONIP00000061752annotation not available (143 aa)
ENSONIP00000061932annotation not available (113 aa)
LOC100693699Histone H2A; Belongs to the histone H2A family. (136 aa)
LOC100694115Histone H2A.Z. (141 aa)
ENSONIP00000063402annotation not available (94 aa)
polr1bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1138 aa)
znrd1DNA-directed RNA polymerase I subunit RPA12. (129 aa)
ubtfUpstream binding transcription factor. (742 aa)
polr2fPolymerase (RNA) II (DNA directed) polypeptide F. (127 aa)
ENSONIP00000064303annotation not available (84 aa)
ENSONIP00000064548annotation not available (131 aa)
ENSONIP00000064706annotation not available (92 aa)
LOC100701661Methyl-CpG-binding domain protein 3 isoform X1. (297 aa)
gtf2h5General transcription factor IIH, polypeptide 5. (71 aa)
LOC100689862Histone H2B 1/2. (124 aa)
I3KFX5_ORENIDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1566 aa)
Polr1cRNA polymerase I and III subunit C. (360 aa)
I3L053_ORENIUncharacterized protein. (134 aa)
ENSONIP00000067435annotation not available (108 aa)
ENSONIP00000067847Histone H4-like. (96 aa)
LOC100711479Retinoblastoma binding protein 4. (449 aa)
ENSONIP00000070717annotation not available (111 aa)
ENSONIP00000071258annotation not available (113 aa)
ENSONIP00000073260annotation not available (95 aa)
ENSONIP00000073881annotation not available (231 aa)
LOC100689862-2Histone H2B 1/2. (124 aa)
ENSONIP00000077839annotation not available (93 aa)
polr2lDNA-directed RNA polymerases I, II, and III subunit RPABC5. (67 aa)
LOC100695351Retinoblastoma binding protein 4, like. (479 aa)
ENSONIP00000079413annotation not available (128 aa)
H3-3BHistone H3.3. (136 aa)
tbpTATA box binding protein. (307 aa)
polr2kDNA-directed RNA polymerases I, II, and III subunit RPABC4. (58 aa)
ENSONIP00000081065annotation not available (94 aa)
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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