72 items (Oreochromis niloticus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RAB11B	Ras-related protein Rab-11B. (235 aa)
	ENSONIP00000000885	TSC complex subunit 1a. (924 aa)
	LOC100705405	RAB GTPase activating protein 1-like 2. (353 aa)
	tbc1d14	TBC1 domain family, member 14. (725 aa)
	gga3	Golgi associated, gamma adaptin ear containing, ARF binding protein 3b. (727 aa)
	LOC100706302	RAB11a, member RAS oncogene family, like. (216 aa)
	LOC100697758	Uncharacterized protein. (218 aa)
	GRTP1	Growth hormone regulated TBC protein 1b. (351 aa)
	LOC100692392	Uncharacterized protein. (226 aa)
	LOC100695826	Rab-GAP TBC domain-containing protein. (470 aa)
	LOC100695509	RAB guanine nucleotide exchange factor (GEF) 1, like. (504 aa)
	ulk1	Unc-51 like autophagy activating kinase 1. (1025 aa)
	LOC100697104	Uncharacterized protein. (610 aa)
	tbc1d2	TBC1 domain family, member 2. (1143 aa)
	I3JAK0_ORENI	Uncharacterized protein. (364 aa)
	LOC100698798	TBC1 domain family, member 7. (294 aa)
	LOC100703328	Si:dkey-16l2.16. (208 aa)
	tbc1d10b	TBC1 domain family, member 10b. (917 aa)
	ulk2	Unc-51 like autophagy activating kinase 2. (1039 aa)
	Tbc1d10a	TBC1 domain family, member 10Aa. (504 aa)
	LOC100699294	Unc-51 like autophagy activating kinase 1a. (905 aa)
	LOC100701038	Synaptotagmin-like protein 2 isoform X2. (1692 aa)
	LOC100689790	RAB33B, member RAS oncogene family a. (240 aa)
	optn	Optineurin. (528 aa)
	rabep1	Rabaptin, RAB GTPase binding effector protein 1. (872 aa)
	LOC100692202	Growth hormone regulated TBC protein 1b. (368 aa)
	LOC100703240	Si:dkeyp-19e1.3. (821 aa)
	tbc1d2b	TBC1 domain family, member 2B. (991 aa)
	rab4a	RAB4a, member RAS oncogene family. (213 aa)
	Rabgef1	RAB guanine nucleotide exchange factor (GEF) 1. (509 aa)
	tbc1d30	TBC1 domain family member 30 isoform X1. (1140 aa)
	Tbc1d25	TBC1 domain family, member 25. (926 aa)
	LOC100694605	Golgi associated, gamma adaptin ear containing, ARF binding protein 3a. (752 aa)
	LOC100703352	RAB8A, member RAS oncogene family. (206 aa)
	I3KTJ2_ORENI	Rabaptin, RAB GTPase binding effector protein 2. (447 aa)
	LOC100696865	Uncharacterized protein. (311 aa)
	ENSONIP00000026111	ADP-ribosylation factor 6b. (111 aa)
	Lg12h9orf116	UPF0691 protein C9orf116 homolog. (136 aa)
	ENSONIP00000029780	annotation not available (203 aa)
	ENSONIP00000030679	annotation not available (116 aa)
	rab5c	RAB5C, member RAS oncogene family. (220 aa)
	ENSONIP00000033379	annotation not available (311 aa)
	rab8a	RAB8A, member RAS oncogene family. (209 aa)
	arl15	ADP-ribosylation factor-like protein 15 isoform X4. (222 aa)
	LOC100697224	RAB11B, member RAS oncogene family, a. (218 aa)
	LOC100702116	RAB33A, member RAS oncogene family. (296 aa)
	ENSONIP00000042545	annotation not available (145 aa)
	LOC100692916	Golgi associated, gamma adaptin ear containing, ARF binding protein 1. (662 aa)
	RABGAP1L	RAB GTPase activating protein 1 like. (1140 aa)
	LOC102076290	Ras-related protein Rab-7A. (210 aa)
	I3IYR9_ORENI	Uncharacterized protein. (415 aa)
	sytl1	Uncharacterized protein. (529 aa)
	LOC100704495	TSC complex subunit 1b. (1275 aa)
	LOC109194243	TBC1 domain family member 12 isoform X1. (843 aa)
	LOC100704868	RAB5A, member RAS oncogene family, b. (217 aa)
	LOC102078242	Uncharacterized protein. (750 aa)
	TBC1D13	TBC1 domain family member 13. (398 aa)
	ENSONIP00000061006	Calponin homology domain-containing protein DDB_G0272472. (331 aa)
	ENSONIP00000062438	TBC1 domain family member 10B. (342 aa)
	I3JNW5_ORENI	Uncharacterized protein. (633 aa)
	rab35	RAB35, member RAS oncogene family b. (201 aa)
	tbc1d17	TBC1 domain family, member 17. (694 aa)
	I3KPF6_ORENI	TBC1 domain family, member 15. (626 aa)
	RAB11A	RAB11A, member RAS oncogene family. (215 aa)
	LOC100691065	Ras-related protein Rab-8B. (207 aa)
	ENSONIP00000071525	TBC1 domain family member 2A-like. (88 aa)
	tbc1d16	TBC1 domain family, member 16. (768 aa)
	I3KEV6_ORENI	Si:ch211-288d18.1. (604 aa)
	rabgap1	RAB GTPase activating protein 1. (1084 aa)
	tbc1d24	TBC1 domain family, member 24. (623 aa)
	tsc2	Rap-GAP domain-containing protein. (1899 aa)
	ENSONIP00000078502	annotation not available (107 aa)

Your Current Organism:

Oreochromis niloticus

NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSONIP00000000885	LOC100697224	ENSONIP00000000885	ENSONIP00000038401	TSC complex subunit 1a.	RAB11B, member RAS oncogene family, a.	0.402
ENSONIP00000000885	LOC100697758	ENSONIP00000000885	ENSONIP00000003184	TSC complex subunit 1a.	Uncharacterized protein.	0.402
ENSONIP00000000885	LOC100698798	ENSONIP00000000885	ENSONIP00000008045	TSC complex subunit 1a.	TBC1 domain family, member 7.	0.967
ENSONIP00000000885	LOC100706302	ENSONIP00000000885	ENSONIP00000002848	TSC complex subunit 1a.	RAB11a, member RAS oncogene family, like.	0.402
ENSONIP00000000885	RAB11A	ENSONIP00000000885	ENSONIP00000066679	TSC complex subunit 1a.	RAB11A, member RAS oncogene family.	0.402
ENSONIP00000000885	RAB11B	ENSONIP00000000885	ENSONIP00000080329	TSC complex subunit 1a.	Ras-related protein Rab-11B.	0.402
ENSONIP00000000885	tsc2	ENSONIP00000000885	ENSONIP00000077974	TSC complex subunit 1a.	Rap-GAP domain-containing protein.	0.971
ENSONIP00000026111	ENSONIP00000061006	ENSONIP00000026111	ENSONIP00000061006	ADP-ribosylation factor 6b.	Calponin homology domain-containing protein DDB_G0272472.	0.526
ENSONIP00000026111	ENSONIP00000062438	ENSONIP00000026111	ENSONIP00000062438	ADP-ribosylation factor 6b.	TBC1 domain family member 10B.	0.442
ENSONIP00000026111	ENSONIP00000071525	ENSONIP00000026111	ENSONIP00000071525	ADP-ribosylation factor 6b.	TBC1 domain family member 2A-like.	0.492
ENSONIP00000026111	GRTP1	ENSONIP00000026111	ENSONIP00000004014	ADP-ribosylation factor 6b.	Growth hormone regulated TBC protein 1b.	0.592
ENSONIP00000026111	I3JNW5_ORENI	ENSONIP00000026111	ENSONIP00000062477	ADP-ribosylation factor 6b.	Uncharacterized protein.	0.444
ENSONIP00000026111	LOC100692202	ENSONIP00000026111	ENSONIP00000017837	ADP-ribosylation factor 6b.	Growth hormone regulated TBC protein 1b.	0.592
ENSONIP00000026111	LOC100692916	ENSONIP00000026111	ENSONIP00000044263	ADP-ribosylation factor 6b.	Golgi associated, gamma adaptin ear containing, ARF binding protein 1.	0.444
ENSONIP00000026111	LOC100694605	ENSONIP00000026111	ENSONIP00000022843	ADP-ribosylation factor 6b.	Golgi associated, gamma adaptin ear containing, ARF binding protein 3a.	0.881
ENSONIP00000026111	LOC100695826	ENSONIP00000026111	ENSONIP00000004445	ADP-ribosylation factor 6b.	Rab-GAP TBC domain-containing protein.	0.679
ENSONIP00000026111	LOC100697104	ENSONIP00000026111	ENSONIP00000004873	ADP-ribosylation factor 6b.	Uncharacterized protein.	0.444
ENSONIP00000026111	LOC100697224	ENSONIP00000026111	ENSONIP00000038401	ADP-ribosylation factor 6b.	RAB11B, member RAS oncogene family, a.	0.426
ENSONIP00000026111	LOC100697758	ENSONIP00000026111	ENSONIP00000003184	ADP-ribosylation factor 6b.	Uncharacterized protein.	0.426
ENSONIP00000026111	LOC100703328	ENSONIP00000026111	ENSONIP00000011867	ADP-ribosylation factor 6b.	Si:dkey-16l2.16.	0.541