50 items (Oreochromis niloticus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	actl6a	Actin-like 6A; Belongs to the actin family. (432 aa)
	LOC100693961	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1b. (947 aa)
	SCML2	Scm polycomb group protein like 2. (685 aa)
	LOC100699925	Scm polycomb group protein like 2. (685 aa)
	LOC100691239	Runt-related transcription factor. (480 aa)
	LOC100691722	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1. (474 aa)
	LOC100707304	Uncharacterized protein. (984 aa)
	I3JMR8_ORENI	ARID domain-containing protein. (1813 aa)
	smarca4	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4a. (1628 aa)
	csnk2a2	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (355 aa)
	arid2	AT rich interactive domain 2 (ARID, RFX-like). (1688 aa)
	I3K4Y7_ORENI	Uncharacterized protein. (768 aa)
	Pcgf5	Polycomb group ring finger 5a. (258 aa)
	scmh1	SAM domain-containing protein. (774 aa)
	smarcd2	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2. (501 aa)
	I3KKM5_ORENI	Chromobox homolog 8a (Pc class homolog, Drosophila). (350 aa)
	I3KNN9_ORENI	Uncharacterized protein. (1608 aa)
	phc3	Uncharacterized protein. (938 aa)
	I3KRB5_ORENI	AT rich interactive domain 1B (SWI1-like). (1954 aa)
	CBX2	Chromobox 2. (533 aa)
	rybp	RING1 and YY1 binding protein b. (268 aa)
	LOC100710962	Casein kinase II subunit beta. (228 aa)
	I3KRY4_ORENI	Polybromo 1. (1678 aa)
	smarcc2	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2. (1084 aa)
	Bmi1	Bmi1 polycomb ring finger oncogene 1a. (335 aa)
	smarce1	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1. (506 aa)
	csnk2b	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (233 aa)
	cbx6	Chromobox homolog 6a. (509 aa)
	LOC100698130	AT rich interactive domain 1Ab (SWI-like). (2303 aa)
	smarcd1	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1. (514 aa)
	cbfb	Core-binding factor subunit beta. (188 aa)
	LOC100696262	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family. (402 aa)
	LOC100704433	Polybromo 1, like. (1657 aa)
	RING1	RING-type domain-containing protein. (394 aa)
	smarcc1	Uncharacterized protein. (1138 aa)
	I3KKM2_ORENI	Chromobox homolog 4 (Pc class homolog, Drosophila). (548 aa)
	LOC100696470	AT rich interactive domain 1Aa (SWI-like). (2307 aa)
	I3K8L8_ORENI	Activator of transcription and developmental regulator AUTS2 a. (1209 aa)
	rnf2	Ring finger protein 2. (397 aa)
	LOC100704669	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family. (368 aa)
	cbx4	Chromobox 4. (573 aa)
	I3JG14_ORENI	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3b. (491 aa)
	LOC100699288	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2. (1626 aa)
	LOC100698988	E1A binding protein p300 a. (2777 aa)
	LOC100700725	E1A binding protein p300 b. (2799 aa)
	cbx2	Chromobox homolog 2 (Drosophila Pc class). (527 aa)
	cbx8	Chromobox homolog 8b. (362 aa)
	LOC100710852	Casein kinase 2, alpha 4 polypeptide; Belongs to the protein kinase superfamily. (393 aa)
	LOC100690588	Casein kinase 2, alpha prime polypeptide a; Belongs to the protein kinase superfamily. (445 aa)
	LOC100534434	Zgc:86598; Belongs to the protein kinase superfamily. (392 aa)

Your Current Organism:

Oreochromis niloticus

NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Bmi1	CBX2	ENSONIP00000034886	ENSONIP00000024026	Bmi1 polycomb ring finger oncogene 1a.	Chromobox 2.	0.867
Bmi1	I3K4Y7_ORENI	ENSONIP00000034886	ENSONIP00000016183	Bmi1 polycomb ring finger oncogene 1a.	Uncharacterized protein.	0.599
Bmi1	I3K8L8_ORENI	ENSONIP00000034886	ENSONIP00000055105	Bmi1 polycomb ring finger oncogene 1a.	Activator of transcription and developmental regulator AUTS2 a.	0.457
Bmi1	I3KKM2_ORENI	ENSONIP00000034886	ENSONIP00000053659	Bmi1 polycomb ring finger oncogene 1a.	Chromobox homolog 4 (Pc class homolog, Drosophila).	0.848
Bmi1	I3KKM5_ORENI	ENSONIP00000034886	ENSONIP00000021670	Bmi1 polycomb ring finger oncogene 1a.	Chromobox homolog 8a (Pc class homolog, Drosophila).	0.859
Bmi1	LOC100534434	ENSONIP00000034886	ENSONIP00000080843	Bmi1 polycomb ring finger oncogene 1a.	Zgc:86598; Belongs to the protein kinase superfamily.	0.407
Bmi1	LOC100690588	ENSONIP00000034886	ENSONIP00000079569	Bmi1 polycomb ring finger oncogene 1a.	Casein kinase 2, alpha prime polypeptide a; Belongs to the protein kinase superfamily.	0.407
Bmi1	LOC100691239	ENSONIP00000034886	ENSONIP00000006179	Bmi1 polycomb ring finger oncogene 1a.	Runt-related transcription factor.	0.640
Bmi1	LOC100699925	ENSONIP00000034886	ENSONIP00000004307	Bmi1 polycomb ring finger oncogene 1a.	Scm polycomb group protein like 2.	0.815
Bmi1	LOC100707304	ENSONIP00000034886	ENSONIP00000008853	Bmi1 polycomb ring finger oncogene 1a.	Uncharacterized protein.	0.599
Bmi1	LOC100710852	ENSONIP00000034886	ENSONIP00000077265	Bmi1 polycomb ring finger oncogene 1a.	Casein kinase 2, alpha 4 polypeptide; Belongs to the protein kinase superfamily.	0.407
Bmi1	LOC100710962	ENSONIP00000034886	ENSONIP00000027557	Bmi1 polycomb ring finger oncogene 1a.	Casein kinase II subunit beta.	0.550
Bmi1	Pcgf5	ENSONIP00000034886	ENSONIP00000019485	Bmi1 polycomb ring finger oncogene 1a.	Polycomb group ring finger 5a.	0.595
Bmi1	RING1	ENSONIP00000034886	ENSONIP00000053310	Bmi1 polycomb ring finger oncogene 1a.	RING-type domain-containing protein.	0.948
Bmi1	SCML2	ENSONIP00000034886	ENSONIP00000003960	Bmi1 polycomb ring finger oncogene 1a.	Scm polycomb group protein like 2.	0.815
Bmi1	cbfb	ENSONIP00000034886	ENSONIP00000045609	Bmi1 polycomb ring finger oncogene 1a.	Core-binding factor subunit beta.	0.664
Bmi1	cbx2	ENSONIP00000034886	ENSONIP00000075634	Bmi1 polycomb ring finger oncogene 1a.	Chromobox homolog 2 (Drosophila Pc class).	0.858
Bmi1	cbx4	ENSONIP00000034886	ENSONIP00000060916	Bmi1 polycomb ring finger oncogene 1a.	Chromobox 4.	0.848
Bmi1	cbx6	ENSONIP00000034886	ENSONIP00000039741	Bmi1 polycomb ring finger oncogene 1a.	Chromobox homolog 6a.	0.835
Bmi1	cbx8	ENSONIP00000034886	ENSONIP00000075927	Bmi1 polycomb ring finger oncogene 1a.	Chromobox homolog 8b.	0.859