STRINGSTRING
edem1 edem1 uggt1 uggt1 marchf7 marchf7 LOC100692227 LOC100692227 LOC100706542 LOC100706542 edem3 edem3 marchf4 marchf4 LOC100702058 LOC100702058 uba52 uba52 LOC100700979 LOC100700979 MARCHF6 MARCHF6 LOC100700920 LOC100700920 kxd1 kxd1 LOC100690953 LOC100690953 rps27a rps27a I3KI96_ORENI I3KI96_ORENI rnf103 rnf103 MARCHF9 MARCHF9 I3KBP7_ORENI I3KBP7_ORENI marchf2 marchf2 Uggt2 Uggt2 marchf8 marchf8 rnf139 rnf139 ENSONIP00000047919 ENSONIP00000047919 marchf11 marchf11
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
edem1alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (647 aa)
uggt1UDP-glucose glycoprotein glucosyltransferase 1. (1582 aa)
marchf7Membrane-associated ring finger (C3HC4) 7. (799 aa)
LOC100692227RING-CH-type domain-containing protein. (248 aa)
LOC100706542alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (858 aa)
edem3alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (901 aa)
marchf4Membrane-associated ring finger (C3HC4) 4. (400 aa)
LOC100702058RING-CH-type domain-containing protein. (248 aa)
uba52Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
LOC100700979alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (685 aa)
MARCHF6Membrane associated ring-CH-type finger 6. (915 aa)
LOC100700920Chromodomain-helicase-DNA-binding protein Mi-2 homolog. (559 aa)
kxd1KxDL motif containing 1. (184 aa)
LOC100690953RING-CH-type domain-containing protein. (927 aa)
rps27aRibosomal protein S27a. (156 aa)
I3KI96_ORENIMembrane-associated ring finger (C3HC4) 9. (360 aa)
rnf103Ring finger protein 103. (700 aa)
MARCHF9Membrane associated ring-CH-type finger 9. (338 aa)
I3KBP7_ORENIalpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (543 aa)
marchf2Membrane-associated ring finger (C3HC4) 2. (253 aa)
Uggt2UDP-glucose glycoprotein glucosyltransferase 2. (1490 aa)
marchf8Membrane-associated ring finger (C3HC4) 8. (282 aa)
rnf139Ring finger protein 139. (704 aa)
ENSONIP00000047919Ubiquitin B. (354 aa)
marchf11Membrane-associated ring finger (C3HC4) 11. (349 aa)
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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