STRINGSTRING
uba52 uba52 LOC100700979 LOC100700979 LOC100700920 LOC100700920 LOC100690953 LOC100690953 uggt1 uggt1 marchf7 marchf7 LOC100692227 LOC100692227 MARCHF6 MARCHF6 kxd1 kxd1 rps27a rps27a I3KI96_ORENI I3KI96_ORENI rnf103 rnf103 MARCHF9 MARCHF9 I3KBP7_ORENI I3KBP7_ORENI marchf2 marchf2 Uggt2 Uggt2 marchf8 marchf8 rnf139 rnf139 ENSONIP00000047919 ENSONIP00000047919 marchf11 marchf11 edem1 edem1 LOC100706542 LOC100706542 edem3 edem3 marchf4 marchf4 LOC100702058 LOC100702058
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
uba52Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
LOC100700979alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (685 aa)
LOC100700920Chromodomain-helicase-DNA-binding protein Mi-2 homolog. (559 aa)
LOC100690953RING-CH-type domain-containing protein. (927 aa)
uggt1UDP-glucose glycoprotein glucosyltransferase 1. (1582 aa)
marchf7Membrane-associated ring finger (C3HC4) 7. (799 aa)
LOC100692227RING-CH-type domain-containing protein. (248 aa)
MARCHF6Membrane associated ring-CH-type finger 6. (915 aa)
kxd1KxDL motif containing 1. (184 aa)
rps27aRibosomal protein S27a. (156 aa)
I3KI96_ORENIMembrane-associated ring finger (C3HC4) 9. (360 aa)
rnf103Ring finger protein 103. (700 aa)
MARCHF9Membrane associated ring-CH-type finger 9. (338 aa)
I3KBP7_ORENIalpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (543 aa)
marchf2Membrane-associated ring finger (C3HC4) 2. (253 aa)
Uggt2UDP-glucose glycoprotein glucosyltransferase 2. (1490 aa)
marchf8Membrane-associated ring finger (C3HC4) 8. (282 aa)
rnf139Ring finger protein 139. (704 aa)
ENSONIP00000047919Ubiquitin B. (354 aa)
marchf11Membrane-associated ring finger (C3HC4) 11. (349 aa)
edem1alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (647 aa)
LOC100706542alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (858 aa)
edem3alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (901 aa)
marchf4Membrane-associated ring finger (C3HC4) 4. (400 aa)
LOC100702058RING-CH-type domain-containing protein. (248 aa)
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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