STRINGSTRING
ENSONIP00000042966 ENSONIP00000042966 hdac6 hdac6 LOC100695822 LOC100695822 dync1li2 dync1li2 Prkn Prkn vim vim LOC100702414 LOC100702414 LOC100698256 LOC100698256 uba52 uba52 kxd1 kxd1 I3K2H8_ORENI I3K2H8_ORENI rps27a rps27a LOC100712088 LOC100712088 ENSONIP00000025880 ENSONIP00000025880 DYNC1I1 DYNC1I1 LOC100712348 LOC100712348 LOC112841648 LOC112841648 LOC100704022 LOC100704022 LOC102081483 LOC102081483 cftr cftr I3KF91_ORENI I3KF91_ORENI LOC100694867 LOC100694867 LOC100695265 LOC100695265 LOC100698873 LOC100698873 LOC109197098 LOC109197098 ENSONIP00000047919 ENSONIP00000047919 TUBA4A TUBA4A tube1 tube1 AKAP9 AKAP9 cetn3 cetn3 ENSONIP00000053078 ENSONIP00000053078 arl13b arl13b park7 park7 LOC109194398 LOC109194398 LOC100699741 LOC100699741 ENSONIP00000064133 ENSONIP00000064133 LOC100702273 LOC100702273 LOC100705329 LOC100705329 ENSONIP00000069794 ENSONIP00000069794 LOC109197651 LOC109197651 LOC100690967 LOC100690967 ENSONIP00000072381 ENSONIP00000072381 LOC100694500 LOC100694500 TUBA1B TUBA1B DYNLL2 DYNLL2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSONIP00000042966Tubulin, beta 2b. (149 aa)
hdac6Histone deacetylase 6. (1104 aa)
LOC100695822Centrin 4. (171 aa)
dync1li2Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. (498 aa)
PrknE3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. (441 aa)
vimVimentin like; Belongs to the intermediate filament family. (455 aa)
LOC100702414Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (453 aa)
LOC100698256Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (473 aa)
uba52Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
kxd1KxDL motif containing 1. (184 aa)
I3K2H8_ORENITubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (71 aa)
rps27aRibosomal protein S27a. (156 aa)
LOC100712088Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (453 aa)
ENSONIP00000025880Tubulin, alpha 4 like. (298 aa)
DYNC1I1Dynein cytoplasmic 1 intermediate chain 1. (645 aa)
LOC100712348Ubiquitin-conjugating enzyme E2Nb; Belongs to the ubiquitin-conjugating enzyme family. (254 aa)
LOC112841648Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (449 aa)
LOC100704022Tubulin alpha chain-like. (499 aa)
LOC102081483Ubiquitin-conjugating enzyme E2 variant 1. (153 aa)
cftrCystic fibrosis transmembrane conductance regulator; Epithelial ion channel that plays an important role in the regulation of epithelial ion and water transport and fluid homeostasis. Mediates the transport of chloride ions across the cell membrane. Channel activity is coupled to ATP hydrolysis. The ion channel is also permeable to HCO(3-); selectivity depends on the extracellular chloride concentration. Exerts its function also by modulating the activity of other ion channels and transporters. Contributes to the regulation of the pH and the ion content of the epithelial fluid layer. (1506 aa)
I3KF91_ORENIIntraflagellar transport 88 homolog. (840 aa)
LOC100694867Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (501 aa)
LOC100695265Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (449 aa)
LOC100698873Dynein light chain. (89 aa)
LOC109197098Tubulin alpha-1A chain isoform X1. (560 aa)
ENSONIP00000047919Ubiquitin B. (354 aa)
TUBA4ATubulin, alpha 8 like 2; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (577 aa)
tube1Tubulin, epsilon 1; Belongs to the tubulin family. (475 aa)
AKAP9A-kinase anchoring protein 9. (4200 aa)
cetn3Centrin 3. (181 aa)
ENSONIP00000053078annotation not available (109 aa)
arl13bADP-ribosylation factor-like 13b. (407 aa)
park7Parkinson protein 7. (196 aa)
LOC109194398Tubulin alpha chain-like. (473 aa)
LOC100699741UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (138 aa)
ENSONIP00000064133annotation not available (110 aa)
LOC100702273Dynein, cytoplasmic 1, intermediate chain 2a. (647 aa)
LOC100705329Dynein light chain 2, cytoplasmic. (89 aa)
ENSONIP00000069794Tubulin beta-5 chain. (123 aa)
LOC109197651Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (545 aa)
LOC100690967Dynein, cytoplasmic 1, intermediate chain 2b. (639 aa)
ENSONIP00000072381annotation not available (116 aa)
LOC100694500Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. (487 aa)
TUBA1BTubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (476 aa)
DYNLL2Dynein light chain 2, cytoplasmic. (89 aa)
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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