STRINGSTRING
atg5 atg5 AKAP9 AKAP9 tube1 tube1 ulk1 ulk1 I3J608_ORENI I3J608_ORENI dync1li2 dync1li2 mterf3 mterf3 LOC100709473 LOC100709473 LOC100695822 LOC100695822 hdac6 hdac6 sqstm1 sqstm1 cftr cftr LOC102081483 LOC102081483 ENSONIP00000036944 ENSONIP00000036944 csnk2b csnk2b LOC100704022 LOC100704022 LOC112841648 LOC112841648 ENSONIP00000033379 ENSONIP00000033379 ENSONIP00000030679 ENSONIP00000030679 LOC100712348 LOC100712348 vdac1 vdac1 ENSONIP00000029780 ENSONIP00000029780 Mfn2 Mfn2 I3IZT9_ORENI I3IZT9_ORENI DYNC1I1 DYNC1I1 LOC100710962 LOC100710962 ENSONIP00000025880 ENSONIP00000025880 LOC100712088 LOC100712088 ILRUN ILRUN pink1 pink1 fundc1 fundc1 rps27a rps27a I3K2H8_ORENI I3K2H8_ORENI kxd1 kxd1 pex5 pex5 uba52 uba52 FUNDC1 FUNDC1 LOC100698256 LOC100698256 map1lc3b map1lc3b csnk2a2 csnk2a2 LOC100699294 LOC100699294 ulk2 ulk2 TOMM20 TOMM20 tomm70 tomm70 LOC100702414 LOC100702414 vim vim Prkn Prkn SRC SRC atm atm I3IYR9_ORENI I3IYR9_ORENI TUBA4A TUBA4A ENSONIP00000047919 ENSONIP00000047919 LOC109197098 LOC109197098 LOC100696843 LOC100696843 TOMM40L TOMM40L LOC100698873 LOC100698873 LOC100695265 LOC100695265 I3K989_ORENI I3K989_ORENI ENSONIP00000042966 ENSONIP00000042966 ENSONIP00000042545 ENSONIP00000042545 LOC100694867 LOC100694867 I3KF91_ORENI I3KF91_ORENI LOC100534434 LOC100534434 DYNLL2 DYNLL2 LOC100690588 LOC100690588 TUBA1B TUBA1B ENSONIP00000078502 ENSONIP00000078502 fndc3a fndc3a Pwwp2a Pwwp2a LOC100710852 LOC100710852 LOC100708734 LOC100708734 LOC100694500 LOC100694500 LOC100707887 LOC100707887 Atg12 Atg12 usp30 usp30 LOC100691366 LOC100691366 ENSONIP00000072381 ENSONIP00000072381 LOC100690967 LOC100690967 LOC109197651 LOC109197651 ENSONIP00000069794 ENSONIP00000069794 LOC100696763 LOC100696763 LOC100705329 LOC100705329 LOC100703030 LOC100703030 pgam5 pgam5 LOC100702273 LOC100702273 map1lc3a map1lc3a ENSONIP00000064133 ENSONIP00000064133 LOC100699741 LOC100699741 mfn1 mfn1 LOC109194398 LOC109194398 LOC100692677 LOC100692677 tomm22 tomm22 TOMM7 TOMM7 park7 park7 tomm6 tomm6 arl13b arl13b LOC100699012 LOC100699012 ENSONIP00000053078 ENSONIP00000053078 nbr1 nbr1 cetn3 cetn3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
atg5Autophagy protein 5; Involved in autophagic vesicle formation. (276 aa)
AKAP9A-kinase anchoring protein 9. (4200 aa)
tube1Tubulin, epsilon 1; Belongs to the tubulin family. (475 aa)
ulk1Unc-51 like autophagy activating kinase 1. (1025 aa)
I3J608_ORENINBR1 autophagy cargo receptor b. (667 aa)
dync1li2Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. (498 aa)
mterf3Mitochondrial transcription termination factor 3. (428 aa)
LOC100709473Zgc:109986. (300 aa)
LOC100695822Centrin 4. (171 aa)
hdac6Histone deacetylase 6. (1104 aa)
sqstm1Sequestosome 1. (436 aa)
cftrCystic fibrosis transmembrane conductance regulator; Epithelial ion channel that plays an important role in the regulation of epithelial ion and water transport and fluid homeostasis. Mediates the transport of chloride ions across the cell membrane. Channel activity is coupled to ATP hydrolysis. The ion channel is also permeable to HCO(3-); selectivity depends on the extracellular chloride concentration. Exerts its function also by modulating the activity of other ion channels and transporters. Contributes to the regulation of the pH and the ion content of the epithelial fluid layer. (1506 aa)
LOC102081483Ubiquitin-conjugating enzyme E2 variant 1. (153 aa)
ENSONIP00000036944annotation not available (74 aa)
csnk2bCasein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (233 aa)
LOC100704022Tubulin alpha chain-like. (499 aa)
LOC112841648Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (449 aa)
ENSONIP00000033379annotation not available (311 aa)
ENSONIP00000030679annotation not available (116 aa)
LOC100712348Ubiquitin-conjugating enzyme E2Nb; Belongs to the ubiquitin-conjugating enzyme family. (254 aa)
vdac1Voltage-dependent anion channel 1. (318 aa)
ENSONIP00000029780annotation not available (203 aa)
Mfn2Mitofusin 2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (796 aa)
I3IZT9_ORENIPeroxisomal biogenesis factor 5-like a. (616 aa)
DYNC1I1Dynein cytoplasmic 1 intermediate chain 1. (645 aa)
LOC100710962Casein kinase II subunit beta. (228 aa)
ENSONIP00000025880Tubulin, alpha 4 like. (298 aa)
LOC100712088Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (453 aa)
ILRUNInflammation and lipid regulator with UBA-like and NBR1-like domains. (288 aa)
pink1PTEN induced kinase 1. (574 aa)
fundc1Uncharacterized protein. (167 aa)
rps27aRibosomal protein S27a. (156 aa)
I3K2H8_ORENITubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (71 aa)
kxd1KxDL motif containing 1. (184 aa)
pex5Peroxisomal biogenesis factor 5. (680 aa)
uba52Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
FUNDC1FUN14 domain containing 1. (158 aa)
LOC100698256Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (473 aa)
map1lc3bMicrotubule-associated protein 1 light chain 3 beta. (126 aa)
csnk2a2Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (355 aa)
LOC100699294Unc-51 like autophagy activating kinase 1a. (905 aa)
ulk2Unc-51 like autophagy activating kinase 2. (1039 aa)
TOMM20Translocase of outer mitochondrial membrane 20. (146 aa)
tomm70Translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae). (579 aa)
LOC100702414Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (453 aa)
vimVimentin like; Belongs to the intermediate filament family. (455 aa)
PrknE3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. (441 aa)
SRCTyrosine-protein kinase. (550 aa)
atmNon-specific serine/threonine protein kinase. (3095 aa)
I3IYR9_ORENIUncharacterized protein. (415 aa)
TUBA4ATubulin, alpha 8 like 2; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (577 aa)
ENSONIP00000047919Ubiquitin B. (354 aa)
LOC109197098Tubulin alpha-1A chain isoform X1. (560 aa)
LOC100696843Translocase of outer mitochondrial membrane 40 homolog (yeast). (342 aa)
TOMM40LTranslocase of outer mitochondrial membrane 40 like. (337 aa)
LOC100698873Dynein light chain. (89 aa)
LOC100695265Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (449 aa)
I3K989_ORENIPeroxisomal biogenesis factor 5-like b. (344 aa)
ENSONIP00000042966Tubulin, beta 2b. (149 aa)
ENSONIP00000042545annotation not available (145 aa)
LOC100694867Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (501 aa)
I3KF91_ORENIIntraflagellar transport 88 homolog. (840 aa)
LOC100534434Zgc:86598; Belongs to the protein kinase superfamily. (392 aa)
DYNLL2Dynein light chain 2, cytoplasmic. (89 aa)
LOC100690588Casein kinase 2, alpha prime polypeptide a; Belongs to the protein kinase superfamily. (445 aa)
TUBA1BTubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (476 aa)
ENSONIP00000078502annotation not available (107 aa)
fndc3aFibronectin type III domain containing 3A. (1239 aa)
Pwwp2aPWWP domain containing 2A. (755 aa)
LOC100710852Casein kinase 2, alpha 4 polypeptide; Belongs to the protein kinase superfamily. (393 aa)
LOC100708734Inflammation and lipid regulator with UBA-like and NBR1-like domains. (287 aa)
LOC100694500Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. (487 aa)
LOC100707887Mitochondrial import receptor subunit TOM5 homolog isoform X2. (51 aa)
Atg12Ubiquitin-like protein ATG12. (225 aa)
usp30Ubiquitin carboxyl-terminal hydrolase. (504 aa)
LOC100691366Translocase of outer mitochondrial membrane 40 homolog, like. (385 aa)
ENSONIP00000072381annotation not available (116 aa)
LOC100690967Dynein, cytoplasmic 1, intermediate chain 2b. (639 aa)
LOC109197651Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (545 aa)
ENSONIP00000069794Tubulin beta-5 chain. (123 aa)
LOC100696763Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (741 aa)
LOC100705329Dynein light chain 2, cytoplasmic. (89 aa)
LOC100703030Translocase of outer mitochondrial membrane 20b. (146 aa)
pgam5PGAM family member 5, serine/threonine protein phosphatase, mitochondrial. (300 aa)
LOC100702273Dynein, cytoplasmic 1, intermediate chain 2a. (647 aa)
map1lc3aMicrotubule-associated protein 1 light chain 3 alpha. (122 aa)
ENSONIP00000064133annotation not available (110 aa)
LOC100699741UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (138 aa)
mfn1Mitofusin 1b; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (784 aa)
LOC109194398Tubulin alpha chain-like. (473 aa)
LOC100692677Tyrosine-protein kinase. (593 aa)
tomm22Translocase of outer mitochondrial membrane 22 homolog (yeast). (133 aa)
TOMM7Mitochondrial import receptor subunit TOM7 homolog. (87 aa)
park7Parkinson protein 7. (196 aa)
tomm6Mitochondrial import receptor subunit TOM6 homolog. (64 aa)
arl13bADP-ribosylation factor-like 13b. (407 aa)
LOC100699012Fibronectin type III domain containing 3Ba. (1174 aa)
ENSONIP00000053078annotation not available (109 aa)
nbr1NBR1 autophagy cargo receptor a. (1070 aa)
cetn3Centrin 3. (181 aa)
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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