STRINGSTRING
rpl7l1 rpl7l1 RPL19 RPL19 rsad1 rsad1 rps2 rps2 rpl30 rpl30 rplp1 rplp1 rpl23a rpl23a rps25 rps25 rpl13 rpl13 rpl18 rpl18 rpl28 rpl28 rpl37 rpl37 RPL38 RPL38 rpl9 rpl9 rpl27 rpl27 rps3a rps3a rpl15 rpl15 LOC100693655 LOC100693655 rpl21 rpl21 rpl6 rpl6 rps10 rps10 kxd1 kxd1 rps27a rps27a LOC100689943 LOC100689943 RPL19-2 RPL19-2 LOC100708525 LOC100708525 rps14 rps14 rps26 rps26 rplp0 rplp0 RPS19 RPS19 LOC100691393 LOC100691393 ENSONIP00000028977 ENSONIP00000028977 I3J2M6_ORENI I3J2M6_ORENI ENSONIP00000029827 ENSONIP00000029827 RPL5 RPL5 rpl36 rpl36 RPL5-2 RPL5-2 LOC100707344 LOC100707344 etf1 etf1 ENSONIP00000031680 ENSONIP00000031680 ENSONIP00000031770 ENSONIP00000031770 RPS17 RPS17 ENSONIP00000032299 ENSONIP00000032299 Rpl37a Rpl37a rpl10 rpl10 rpl24 rpl24 ENSONIP00000035932 ENSONIP00000035932 RPL3L RPL3L rpl29 rpl29 LOC100697848 LOC100697848 rps12 rps12 rps21 rps21 Rpl34 Rpl34 LOC100691333 LOC100691333 rps16 rps16 ENSONIP00000041950 ENSONIP00000041950 rpl18a rpl18a rpl14 rpl14 rpl7 rpl7 rps5 rps5 LOC100701961 LOC100701961 ENSONIP00000046810 ENSONIP00000046810 rpl4 rpl4 rpl17 rpl17 rps9 rps9 aknad1 aknad1 LOC100699599 LOC100699599 Rpl12 Rpl12 dmc1 dmc1 LOC100699889 LOC100699889 rps15 rps15 rpl11 rpl11 arl6ip1 arl6ip1 rpl31 rpl31 Rps7 Rps7 Rpl35a Rpl35a RPL7A RPL7A LOC100705775 LOC100705775 Rpl39 Rpl39 NCBP1 NCBP1 UPF1 UPF1 ENSONIP00000059020 ENSONIP00000059020 pabpc4 pabpc4 rpl23 rpl23 ENSONIP00000060841 ENSONIP00000060841 LOC100691806 LOC100691806 rps20 rps20 rps18 rps18 rpl13a rpl13a rpl35 rpl35 rpl32 rpl32 rps15a rps15a rps8 rps8 rps13 rps13 LOC100711235 LOC100711235 rps3 rps3 LOC100702413 LOC100702413 RPL27A RPL27A ENSONIP00000072598 ENSONIP00000072598 I3KBJ9_ORENI I3KBJ9_ORENI rps24 rps24 ENSONIP00000074793 ENSONIP00000074793 ENSONIP00000075314 ENSONIP00000075314 ENSONIP00000076314 ENSONIP00000076314 LOC100711099 LOC100711099 rps4x rps4x ENSONIP00000079022 ENSONIP00000079022 I3J3G6_ORENI I3J3G6_ORENI rps6 rps6 RPS29 RPS29 rps23 rps23
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rpl7l1Ribosomal protein L7-like 1. (273 aa)
RPL19Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (194 aa)
rsad1Radical S-adenosyl methionine domain-containing protein; May be a heme chaperone, appears to bind heme. Homologous bacterial proteins do not have oxygen-independent coproporphyrinogen- III oxidase activity. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L- methionine; Belongs to the anaerobic coproporphyrinogen-III oxidase family. (442 aa)
rps2Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (279 aa)
rpl30Ribosomal protein L30. (116 aa)
rplp1Ribosomal protein, large, P1; Belongs to the eukaryotic ribosomal protein P1/P2 family. (114 aa)
rpl23aRibosomal protein L23a; Belongs to the universal ribosomal protein uL23 family. (220 aa)
rps2540S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (128 aa)
rpl1360S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (211 aa)
rpl1860S ribosomal protein L18; Component of the large ribosomal subunit. (188 aa)
rpl28Ribosomal protein L28. (142 aa)
rpl37Ribosomal protein L37; Binds to the 23S rRNA. (97 aa)
RPL38Ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family. (72 aa)
rpl9Ribosomal protein L9. (192 aa)
rpl2760S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (136 aa)
rps3a40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (266 aa)
rpl15Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (204 aa)
LOC100693655Uncharacterized protein. (1109 aa)
rpl21Ribosomal protein L21. (160 aa)
rpl6Ribosomal protein L6. (325 aa)
rps10Ribosomal protein S10. (168 aa)
kxd1KxDL motif containing 1. (184 aa)
rps27aRibosomal protein S27a. (156 aa)
LOC100689943Ribosomal protein S19. (163 aa)
RPL19-2Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (197 aa)
LOC100708525Ribosomal protein L26. (145 aa)
rps14Ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (193 aa)
rps2640S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (149 aa)
rplp060S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (315 aa)
RPS19Ribosomal protein S19. (175 aa)
LOC100691393Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (647 aa)
ENSONIP00000028977annotation not available (69 aa)
I3J2M6_ORENIRibosomal protein L36A; Belongs to the eukaryotic ribosomal protein eL42 family. (151 aa)
ENSONIP00000029827annotation not available (173 aa)
RPL5Ribosomal protein L5. (299 aa)
rpl3660S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (105 aa)
RPL5-2Large subunit ribosomal protein L5e. (316 aa)
LOC10070734440S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family. (312 aa)
etf1Eukaryotic translation termination factor 1b. (439 aa)
ENSONIP00000031680Nuclear cap-binding protein subunit 2-like. (120 aa)
ENSONIP00000031770annotation not available (203 aa)
RPS17Ribosomal protein S17. (164 aa)
ENSONIP00000032299annotation not available (85 aa)
Rpl37aLarge subunit ribosomal protein L37Ae. (68 aa)
rpl10Ribosomal protein L10. (285 aa)
rpl24Ribosomal protein L24. (432 aa)
ENSONIP00000035932annotation not available (175 aa)
RPL3LRibosomal protein L3 like; Belongs to the universal ribosomal protein uL3 family. (429 aa)
rpl2960S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (64 aa)
LOC100697848Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (659 aa)
rps1240S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (140 aa)
rps2140S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (94 aa)
Rpl34Large subunit ribosomal protein L34e. (156 aa)
LOC10069133340S ribosomal protein S27. (93 aa)
rps16Ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (164 aa)
ENSONIP00000041950Ribosomal protein S28. (63 aa)
rpl18a60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. (212 aa)
rpl14Ribosomal protein L14. (137 aa)
rpl7Ribosomal protein L7. (245 aa)
rps5Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (224 aa)
LOC100701961G1 to S phase transition 1, like. (615 aa)
ENSONIP00000046810Nuclear cap-binding protein subunit 2-like. (91 aa)
rpl4Ribosomal protein L4. (383 aa)
rpl17Ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family. (261 aa)
rps9Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. (194 aa)
aknad1AT-hook-containing transcription factor. (1292 aa)
LOC100699599Uncharacterized protein. (144 aa)
Rpl12Ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family. (225 aa)
dmc1G1 to S phase transition 1. (587 aa)
LOC100699889Ribosomal protein L22-like 1. (129 aa)
rps15Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (170 aa)
rpl11Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family. (178 aa)
arl6ip1ADP-ribosylation factor-like 6 interacting protein 1. (203 aa)
rpl31Ribosomal protein L31. (213 aa)
Rps740S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (207 aa)
Rpl35aLarge subunit ribosomal protein L35Ae. (110 aa)
RPL7ARibosomal protein L7a. (281 aa)
LOC10070577540S ribosomal protein S27 isoform X2. (92 aa)
Rpl39Large subunit ribosomal protein L39e. (52 aa)
NCBP1Nuclear cap binding protein subunit 1. (816 aa)
UPF1UPF1 RNA helicase and ATPase. (1118 aa)
ENSONIP00000059020annotation not available (118 aa)
pabpc4Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (641 aa)
rpl23Ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family. (163 aa)
ENSONIP00000060841annotation not available (125 aa)
LOC100691806Ribosomal protein, large P2, like; Belongs to the eukaryotic ribosomal protein P1/P2 family. (114 aa)
rps20Ribosomal protein S20. (157 aa)
rps18Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family. (1034 aa)
rpl13aRibosomal protein L13a; Belongs to the universal ribosomal protein uL13 family. (205 aa)
rpl35Ribosomal protein L35. (138 aa)
rpl32Ribosomal protein L32. (150 aa)
rps15aRibosomal protein S15a; Belongs to the universal ribosomal protein uS8 family. (160 aa)
rps840S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (253 aa)
rps13Small subunit ribosomal protein S13e. (151 aa)
LOC100711235NAD(P)-bd_dom domain-containing protein. (243 aa)
rps3Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (298 aa)
LOC100702413Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (164 aa)
RPL27ARibosomal protein L27a; Belongs to the universal ribosomal protein uL15 family. (181 aa)
ENSONIP00000072598annotation not available (145 aa)
I3KBJ9_ORENIRibosomal protein, large P2; Belongs to the eukaryotic ribosomal protein P1/P2 family. (139 aa)
rps2440S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (132 aa)
ENSONIP00000074793Small subunit ribosomal protein S17e. (182 aa)
ENSONIP00000075314annotation not available (120 aa)
ENSONIP00000076314Small subunit ribosomal protein S27e. (84 aa)
LOC100711099Ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. (470 aa)
rps4x40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (298 aa)
ENSONIP0000007902260S ribosomal protein L27a-like isoform X3. (30 aa)
I3J3G6_ORENIPolyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (640 aa)
rps640S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (249 aa)
RPS29Ribosomal protein S29. (60 aa)
rps23Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (161 aa)
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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