(28 nodes) Dynamin family network (Oreochromis niloticus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC102081443	Nuclear GTPase SLIP-GC isoform X1. (791 aa)
	srl	Sarcalumenin; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (490 aa)
	LOC102078595	VLIG-type G domain-containing protein. (1802 aa)
	Mfn2	Mitofusin 2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (796 aa)
	LOC102076014	VLIG-type G domain-containing protein. (1756 aa)
	LOC102077119	VLIG-type G domain-containing protein. (1039 aa)
	LOC100709289	Uncharacterized protein. (978 aa)
	LOC100698254	Si:ch211-11k18.4. (451 aa)
	LOC100701412	Nuclear GTPase SLIP-GC. (815 aa)
	LOC100710263	Si:dkey-98f17.5. (448 aa)
	LOC102076498	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (544 aa)
	I3JCP4_ORENI	Si:ch211-114c17.1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (535 aa)
	SRL	Sarcalumenin; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (817 aa)
	EHD2	EH-domain containing 2b; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (540 aa)
	LOC102075847	Uncharacterized protein. (788 aa)
	ENSONIP00000059614	Up-regulator of cell proliferation-like. (889 aa)
	mfn1	Mitofusin 1b; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (784 aa)
	LOC102081276	Nuclear GTPase SLIP-GC isoform X2. (755 aa)
	ENSONIP00000061480	Nuclear GTPase SLIP-GC. (697 aa)
	LOC100697355	EH-domain containing 4; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (576 aa)
	LOC100696763	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (741 aa)
	ENSONIP00000075938	Up-regulator of cell proliferation-like. (1645 aa)
	LOC102080457	Interferon-induced very large GTPase 1 isoform X1. (1878 aa)
	LOC109200182	Nuclear GTPase SLIP-GC-like. (822 aa)
	I3L001_ORENI	Uncharacterized protein. (991 aa)
	ENSONIP00000043274	annotation not available (159 aa)
	LOC100697227	EH-domain containing 3; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (561 aa)
	ENSONIP00000042572	annotation not available (349 aa)

Your Current Organism:

Oreochromis niloticus

NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EHD2	LOC102076498	ENSONIP00000005106	ENSONIP00000007045	EH-domain containing 2b; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.901
LOC100696763	Mfn2	ENSONIP00000068738	ENSONIP00000029383	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Mitofusin 2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.554
LOC102076498	EHD2	ENSONIP00000007045	ENSONIP00000005106	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	EH-domain containing 2b; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.901
Mfn2	LOC100696763	ENSONIP00000029383	ENSONIP00000068738	Mitofusin 2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.554
Mfn2	mfn1	ENSONIP00000029383	ENSONIP00000060000	Mitofusin 2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Mitofusin 1b; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.953
mfn1	Mfn2	ENSONIP00000060000	ENSONIP00000029383	Mitofusin 1b; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Mitofusin 2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.953