41 items (Oreochromis niloticus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC100699552	Phospholipase. (1054 aa)
	RPL19	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (194 aa)
	rps2	Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (279 aa)
	kiaa1841	Si:ch211-189k9.2. (708 aa)
	I3J8W5_ORENI	Phospholipase. (954 aa)
	rpl23a	Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family. (220 aa)
	rps25	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (128 aa)
	LOC100702310	Insulin-like growth factor binding protein 3. (285 aa)
	LOC100710619	Phospholipase. (1031 aa)
	IGFBP3	Insulin like growth factor binding protein 3. (286 aa)
	cpe	Carboxypeptidase E. (469 aa)
	LOC102079941	Apolipoprotein Ba. (4368 aa)
	rpl10a	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family. (217 aa)
	rpl21	Ribosomal protein L21. (160 aa)
	RPL19-2	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (197 aa)
	LOC100698070	Fatty acid binding protein 10a, liver basic. (126 aa)
	LOC100708634	Apolipoprotein A-Ib. (263 aa)
	slc1a7	Amino acid transporter. (578 aa)
	cog7	Component of oligomeric golgi complex 7. (770 aa)
	I3KM06_ORENI	Acyl-CoA synthetase long chain family member 4a. (722 aa)
	igfals	Shisa family member 9b. (785 aa)
	LOC100534501	Luteinizing hormone, beta polypeptide. (145 aa)
	LOC100707344	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family. (312 aa)
	abcf2	ATP-binding cassette, sub-family F (GCN20), member 2b. (628 aa)
	rpl24	Ribosomal protein L24. (432 aa)
	Mbp	Myelin basic protein b. (134 aa)
	LOC100534522	Prolactin. (212 aa)
	LOC100697904	Prolactin 2. (230 aa)
	LOC100692985	Myelin basic protein isoform X1. (196 aa)
	rpl18a	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. (212 aa)
	rpl7	Ribosomal protein L7. (245 aa)
	rpl11	Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family. (178 aa)
	Rimbp2	RIMS binding protein 2. (1656 aa)
	I3JWN3_ORENI	Fucose kinase. (965 aa)
	ghrh	Growth hormone releasing hormone. (215 aa)
	fgg	Fibrinogen gamma chain. (431 aa)
	LOC100700475	Rho GTPase activating protein 12a. (912 aa)
	ugp2	UTP--glucose-1-phosphate uridylyltransferase. (517 aa)
	rps4x	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (298 aa)
	rps6	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (249 aa)
	rps23	Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (161 aa)

Your Current Organism:

Oreochromis niloticus

NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
I3J8W5_ORENI	LOC100699552	ENSONIP00000005305	ENSONIP00000001071	Phospholipase.	Phospholipase.	0.939
I3J8W5_ORENI	LOC100710619	ENSONIP00000005305	ENSONIP00000010390	Phospholipase.	Phospholipase.	0.939
I3JWN3_ORENI	LOC100700475	ENSONIP00000057040	ENSONIP00000068180	Fucose kinase.	Rho GTPase activating protein 12a.	0.523
I3JWN3_ORENI	abcf2	ENSONIP00000057040	ENSONIP00000034466	Fucose kinase.	ATP-binding cassette, sub-family F (GCN20), member 2b.	0.599
I3JWN3_ORENI	cog7	ENSONIP00000057040	ENSONIP00000025232	Fucose kinase.	Component of oligomeric golgi complex 7.	0.570
I3JWN3_ORENI	kiaa1841	ENSONIP00000057040	ENSONIP00000003724	Fucose kinase.	Si:ch211-189k9.2.	0.659
I3JWN3_ORENI	slc1a7	ENSONIP00000057040	ENSONIP00000024188	Fucose kinase.	Amino acid transporter.	0.461
I3KM06_ORENI	LOC102079941	ENSONIP00000028847	ENSONIP00000014732	Acyl-CoA synthetase long chain family member 4a.	Apolipoprotein Ba.	0.418
I3KM06_ORENI	igfals	ENSONIP00000028847	ENSONIP00000029135	Acyl-CoA synthetase long chain family member 4a.	Shisa family member 9b.	0.489
I3KM06_ORENI	rpl11	ENSONIP00000028847	ENSONIP00000053703	Acyl-CoA synthetase long chain family member 4a.	Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.	0.442
I3KM06_ORENI	ugp2	ENSONIP00000028847	ENSONIP00000073645	Acyl-CoA synthetase long chain family member 4a.	UTP--glucose-1-phosphate uridylyltransferase.	0.480
IGFBP3	LOC100702310	ENSONIP00000012146	ENSONIP00000008019	Insulin like growth factor binding protein 3.	Insulin-like growth factor binding protein 3.	0.902
IGFBP3	igfals	ENSONIP00000012146	ENSONIP00000029135	Insulin like growth factor binding protein 3.	Shisa family member 9b.	0.983
LOC100534501	LOC100534522	ENSONIP00000029151	ENSONIP00000038505	Luteinizing hormone, beta polypeptide.	Prolactin.	0.609
LOC100534522	LOC100534501	ENSONIP00000038505	ENSONIP00000029151	Prolactin.	Luteinizing hormone, beta polypeptide.	0.609
LOC100534522	LOC100697904	ENSONIP00000038505	ENSONIP00000042106	Prolactin.	Prolactin 2.	0.904
LOC100534522	ghrh	ENSONIP00000038505	ENSONIP00000060377	Prolactin.	Growth hormone releasing hormone.	0.452
LOC100692985	Mbp	ENSONIP00000042578	ENSONIP00000037308	Myelin basic protein isoform X1.	Myelin basic protein b.	0.594
LOC100692985	cpe	ENSONIP00000042578	ENSONIP00000012727	Myelin basic protein isoform X1.	Carboxypeptidase E.	0.504
LOC100697904	LOC100534522	ENSONIP00000042106	ENSONIP00000038505	Prolactin 2.	Prolactin.	0.904