STRINGSTRING
ddx51 ddx51 LOC100705189 LOC100705189 wrap73 wrap73 rpl13a rpl13a LOC100696823 LOC100696823 tp73 tp73 Prdm16 Prdm16 tprg1l tprg1l ybx1 ybx1 gapdh gapdh arhgef16 arhgef16 LOC100698455 LOC100698455 PLCB2 PLCB2 LOC100703642 LOC100703642 rer1 rer1 gpr153 gpr153 I3J143_ORENI I3J143_ORENI I3J129_ORENI I3J129_ORENI acot7 acot7
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ddx51DEAD (Asp-Glu-Ala-Asp) box polypeptide 51; Belongs to the DEAD box helicase family. (621 aa)
LOC100705189Peptidylprolyl isomerase. (108 aa)
wrap73WD repeat containing, antisense to TP73. (452 aa)
rpl13aRibosomal protein L13a; Belongs to the universal ribosomal protein uL13 family. (205 aa)
LOC100696823Glyceraldehyde-3-phosphate dehydrogenase. (361 aa)
tp73Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. (674 aa)
Prdm16LOW QUALITY PROTEIN: PR domain zinc finger protein 16. (184 aa)
tprg1lTumor protein p63 regulated 1-like. (297 aa)
ybx1Y box binding protein 1. (305 aa)
gapdhGlyceraldehyde-3-phosphate dehydrogenase. (359 aa)
arhgef16Rho guanine nucleotide exchange factor (GEF) 16. (705 aa)
LOC100698455RAD21 cohesin complex component like 1. (547 aa)
PLCB21-phosphatidylinositol 4,5-bisphosphate phosphodiesterase; The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. (1267 aa)
LOC100703642AP2 associated kinase 1a. (1125 aa)
rer1Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment. (214 aa)
gpr153G protein-coupled receptor 153. (710 aa)
I3J143_ORENIEspin. (1295 aa)
I3J129_ORENIPeptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (184 aa)
acot7Acyl-CoA thioesterase 7. (382 aa)
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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