STRINGSTRING
LOC100696823 LOC100696823 gapdhs gapdhs LOC100707066 LOC100707066 Sod2 Sod2 cldn1 cldn1 gapdh gapdh
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC100696823Glyceraldehyde-3-phosphate dehydrogenase. (361 aa)
gapdhsGlyceraldehyde-3-phosphate dehydrogenase. (375 aa)
LOC100707066Interleukin-1. (244 aa)
Sod2Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (294 aa)
cldn1Claudin-1. (223 aa)
gapdhGlyceraldehyde-3-phosphate dehydrogenase. (359 aa)
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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