STRINGSTRING
GOT1 GOT1 cd83 cd83 myd88 myd88 LOC100707066 LOC100707066 LOC109194206 LOC109194206 LOC100703629 LOC100703629 NLRC5 NLRC5 stat1 stat1 mavs mavs Sod2 Sod2 LOC100702139 LOC100702139 got1 got1 ikbke ikbke LOC100702954 LOC100702954 LOC100705311 LOC100705311 I3KF49_ORENI I3KF49_ORENI nod1 nod1 nod2 nod2 dhx58 dhx58 ripk2 ripk2 ifih1 ifih1 traf3 traf3 LOC100709564 LOC100709564 irak4 irak4 TLR8 TLR8 TLR8-2 TLR8-2 irak1 irak1 TLR8-3 TLR8-3 ddx3x ddx3x
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GOT1Aspartate aminotransferase. (410 aa)
cd83Ig-like domain-containing protein. (225 aa)
myd88Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response. (288 aa)
LOC100707066Interleukin-1. (244 aa)
LOC109194206Caspase 10, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family. (470 aa)
LOC100703629Toll-like receptor 3; Belongs to the Toll-like receptor family. (912 aa)
NLRC5NLR family CARD domain containing 5. (1818 aa)
stat1Signal transducer and activator of transcription. (781 aa)
mavsCARD_2 domain-containing protein. (552 aa)
Sod2Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (294 aa)
LOC100702139Uncharacterized protein; Belongs to the peptidase C14A family. (485 aa)
got1Aspartate aminotransferase. (414 aa)
ikbkeInhibitor of nuclear factor kappa B kinase subunit epsilon. (721 aa)
LOC100702954Interferon regulatory factor 3. (466 aa)
LOC100705311Aspartate aminotransferase. (449 aa)
I3KF49_ORENICaspase 20, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family. (467 aa)
nod1Nucleotide-binding oligomerization domain containing 1. (953 aa)
nod2Nucleotide-binding oligomerization domain containing 2. (1004 aa)
dhx58Probable ATP-dependent RNA helicase DHX58. (713 aa)
ripk2Receptor-interacting serine-threonine kinase 2. (570 aa)
ifih1Interferon induced with helicase C domain 1. (1036 aa)
traf3TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (594 aa)
LOC100709564Signal transducer and activator of transcription 1-alpha/beta. (756 aa)
irak4Interleukin-1 receptor-associated kinase 4. (463 aa)
TLR8Toll-like receptor 8. (1037 aa)
TLR8-2Toll like receptor 8. (1040 aa)
irak1Interleukin-1 receptor-associated kinase 1. (752 aa)
TLR8-3Toll-like receptor 8 isoform X1. (1054 aa)
ddx3xDEAD-box helicase 3 X-linked a; Belongs to the DEAD box helicase family. (792 aa)
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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