STRINGSTRING
prkaa1 prkaa1 pafah1b3 pafah1b3 acss2 acss2 LOC100710232 LOC100710232 il10 il10 LOC100697746 LOC100697746 atp5f1a atp5f1a LOC100709974 LOC100709974 AP3S1 AP3S1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
prkaa1Non-specific serine/threonine protein kinase. (580 aa)
pafah1b3Platelet-activating factor acetylhydrolase, isoform Ib, gamma subunit. (223 aa)
acss2Acyl-CoA synthetase short chain family member 2. (698 aa)
LOC100710232Phosphoethanolamine methyltransferase. (522 aa)
il10Interleukin 10. (275 aa)
LOC100697746TNF_2 domain-containing protein. (239 aa)
atp5f1aATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. (578 aa)
LOC100709974ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. (570 aa)
AP3S1Adaptor related protein complex 3 subunit sigma 1. (193 aa)
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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