48 items (Oreochromis niloticus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC106097755	Putative uncharacterized transposon-derived protein F54H12.3. (357 aa)
	ENSONIP00000080692	annotation not available (357 aa)
	cbx7	Chromobox homolog 7b. (260 aa)
	cbx8	Chromobox homolog 8b. (362 aa)
	cbx2	Chromobox homolog 2 (Drosophila Pc class). (527 aa)
	ENSONIP00000075264	annotation not available (357 aa)
	CBX1	Uncharacterized protein. (190 aa)
	ENSONIP00000072085	annotation not available (361 aa)
	cbx1	Chromobox homolog 1b (HP1 beta homolog Drosophila). (179 aa)
	ENSONIP00000070989	annotation not available (439 aa)
	ENSONIP00000070345	annotation not available (1270 aa)
	LOC100696249	Mortality factor 4 like 1. (330 aa)
	ENSONIP00000065830	annotation not available (357 aa)
	LOC100694248	Chromobox homolog 3a (HP1 gamma homolog, Drosophila). (185 aa)
	ENSONIP00000048674	annotation not available (888 aa)
	chd5	Chromodomain helicase DNA binding protein 5. (2000 aa)
	ENSONIP00000047590	annotation not available (357 aa)
	ENSONIP00000040504	annotation not available (361 aa)
	I3IV57_ORENI	Chromodomain helicase DNA binding protein 6. (2730 aa)
	chd1	Chromodomain helicase DNA binding protein 1. (1695 aa)
	cbx6	Chromobox homolog 6a. (509 aa)
	LOC100694541	Chromobox homolog 3b. (192 aa)
	arid4a	AT rich interactive domain 4A (RBP1-like). (1391 aa)
	ENSONIP00000034677	annotation not available (357 aa)
	ENSONIP00000032677	annotation not available (148 aa)
	Chd7	Chromodomain helicase DNA binding protein 7. (2854 aa)
	I3KY64_ORENI	Integrase catalytic domain-containing protein. (357 aa)
	smarcc2	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2. (1084 aa)
	Kat8	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (477 aa)
	CBX2	Chromobox 2. (533 aa)
	I3KKM5_ORENI	Chromobox homolog 8a (Pc class homolog, Drosophila). (350 aa)
	mphosph8	M-phase phosphoprotein 8. (810 aa)
	chd8	Chromodomain-helicase-DNA-binding protein 8; DNA helicase that acts as a chromatin remodeling factor and regulates transcription. Acts as a transcription repressor by remodeling chromatin structure and recruiting histone H1 to target genes. Suppresses p53/TP53-mediated apoptosis by recruiting histone H1 and preventing p53/TP53 transactivation activity. Acts as a negative regulator of Wnt signaling pathway by regulating beta-catenin (CTNNB1) activity. Negatively regulates CTNNB1-targeted gene expression by being recruited specifically to the promoter regions of several CTNNB1 responsive [...] (2621 aa)
	chd2	Chromodomain helicase DNA binding protein 2. (1811 aa)
	cdyl	Chromodomain protein, Y-like. (560 aa)
	Kat5	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (537 aa)
	CDYL2	Chromodomain Y like 2. (511 aa)
	LOC100705962	Chromodomain helicase DNA binding protein 4a. (1970 aa)
	cbx5	Chromobox homolog 5 (HP1 alpha homolog, Drosophila). (199 aa)
	chd4	Uncharacterized protein. (1977 aa)
	LOC100698867	Chromodomain helicase DNA binding protein 3. (1822 aa)
	suv39h1	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily. (411 aa)
	MSL3	MSL complex subunit 3. (545 aa)
	smarcc1	Uncharacterized protein. (1138 aa)
	I3KKM2_ORENI	Chromobox homolog 4 (Pc class homolog, Drosophila). (548 aa)
	chd9	Chromodomain helicase DNA binding protein 9. (3005 aa)
	LOC100691845	MRG domain-containing protein. (323 aa)
	cbx4	Chromobox 4. (573 aa)

Your Current Organism:

Oreochromis niloticus

NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CBX1	LOC100698867	ENSONIP00000073255	ENSONIP00000011685	Uncharacterized protein.	Chromodomain helicase DNA binding protein 3.	0.600
CBX1	LOC100705962	ENSONIP00000073255	ENSONIP00000008816	Uncharacterized protein.	Chromodomain helicase DNA binding protein 4a.	0.600
CBX1	chd4	ENSONIP00000073255	ENSONIP00000016292	Uncharacterized protein.	Uncharacterized protein.	0.600
CBX1	chd5	ENSONIP00000073255	ENSONIP00000048001	Uncharacterized protein.	Chromodomain helicase DNA binding protein 5.	0.600
CBX1	suv39h1	ENSONIP00000073255	ENSONIP00000014663	Uncharacterized protein.	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.	0.841
CBX2	ENSONIP00000032677	ENSONIP00000024026	ENSONIP00000032677	Chromobox 2.	annotation not available	0.429
CBX2	I3KKM2_ORENI	ENSONIP00000024026	ENSONIP00000053659	Chromobox 2.	Chromobox homolog 4 (Pc class homolog, Drosophila).	0.869
CBX2	I3KKM5_ORENI	ENSONIP00000024026	ENSONIP00000021670	Chromobox 2.	Chromobox homolog 8a (Pc class homolog, Drosophila).	0.822
CBX2	cbx2	ENSONIP00000024026	ENSONIP00000075634	Chromobox 2.	Chromobox homolog 2 (Drosophila Pc class).	0.737
CBX2	cbx4	ENSONIP00000024026	ENSONIP00000060916	Chromobox 2.	Chromobox 4.	0.879
CBX2	cbx6	ENSONIP00000024026	ENSONIP00000039741	Chromobox 2.	Chromobox homolog 6a.	0.775
CBX2	cbx7	ENSONIP00000024026	ENSONIP00000076748	Chromobox 2.	Chromobox homolog 7b.	0.429
CBX2	cbx8	ENSONIP00000024026	ENSONIP00000075927	Chromobox 2.	Chromobox homolog 8b.	0.822
CDYL2	Chd7	ENSONIP00000007046	ENSONIP00000031172	Chromodomain Y like 2.	Chromodomain helicase DNA binding protein 7.	0.403
CDYL2	I3IV57_ORENI	ENSONIP00000007046	ENSONIP00000040153	Chromodomain Y like 2.	Chromodomain helicase DNA binding protein 6.	0.403
CDYL2	LOC100698867	ENSONIP00000007046	ENSONIP00000011685	Chromodomain Y like 2.	Chromodomain helicase DNA binding protein 3.	0.473
CDYL2	LOC100705962	ENSONIP00000007046	ENSONIP00000008816	Chromodomain Y like 2.	Chromodomain helicase DNA binding protein 4a.	0.473
CDYL2	cdyl	ENSONIP00000007046	ENSONIP00000017624	Chromodomain Y like 2.	Chromodomain protein, Y-like.	0.597
CDYL2	chd1	ENSONIP00000007046	ENSONIP00000040105	Chromodomain Y like 2.	Chromodomain helicase DNA binding protein 1.	0.403
CDYL2	chd2	ENSONIP00000007046	ENSONIP00000019051	Chromodomain Y like 2.	Chromodomain helicase DNA binding protein 2.	0.403