(5 nodes) Nuclear pore outer ring network (Haplochromis burtoni)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	nup107	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (908 aa)
	nup160	Nucleoporin 160. (1289 aa)
	nup85	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (540 aa)
	nup133	Nucleoporin 133. (1135 aa)
	nup43	Nucleoporin 43. (372 aa)

Your Current Organism:

Haplochromis burtoni

NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
nup107	nup133	ENSHBUP00000002898	ENSHBUP00000025014	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	Nucleoporin 133.	0.999
nup107	nup160	ENSHBUP00000002898	ENSHBUP00000006035	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	Nucleoporin 160.	0.999
nup107	nup43	ENSHBUP00000002898	ENSHBUP00000027523	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	Nucleoporin 43.	0.999
nup107	nup85	ENSHBUP00000002898	ENSHBUP00000009489	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.999
nup133	nup107	ENSHBUP00000025014	ENSHBUP00000002898	Nucleoporin 133.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.999
nup133	nup160	ENSHBUP00000025014	ENSHBUP00000006035	Nucleoporin 133.	Nucleoporin 160.	0.999
nup133	nup43	ENSHBUP00000025014	ENSHBUP00000027523	Nucleoporin 133.	Nucleoporin 43.	0.999
nup133	nup85	ENSHBUP00000025014	ENSHBUP00000009489	Nucleoporin 133.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.999
nup160	nup107	ENSHBUP00000006035	ENSHBUP00000002898	Nucleoporin 160.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.999
nup160	nup133	ENSHBUP00000006035	ENSHBUP00000025014	Nucleoporin 160.	Nucleoporin 133.	0.999
nup160	nup43	ENSHBUP00000006035	ENSHBUP00000027523	Nucleoporin 160.	Nucleoporin 43.	0.999
nup160	nup85	ENSHBUP00000006035	ENSHBUP00000009489	Nucleoporin 160.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.999
nup43	nup107	ENSHBUP00000027523	ENSHBUP00000002898	Nucleoporin 43.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.999
nup43	nup133	ENSHBUP00000027523	ENSHBUP00000025014	Nucleoporin 43.	Nucleoporin 133.	0.999
nup43	nup160	ENSHBUP00000027523	ENSHBUP00000006035	Nucleoporin 43.	Nucleoporin 160.	0.999
nup43	nup85	ENSHBUP00000027523	ENSHBUP00000009489	Nucleoporin 43.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.999
nup85	nup107	ENSHBUP00000009489	ENSHBUP00000002898	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.999
nup85	nup133	ENSHBUP00000009489	ENSHBUP00000025014	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	Nucleoporin 133.	0.999
nup85	nup160	ENSHBUP00000009489	ENSHBUP00000006035	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	Nucleoporin 160.	0.999
nup85	nup43	ENSHBUP00000009489	ENSHBUP00000027523	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	Nucleoporin 43.	0.999