(5 nodes) Mixed, incl. Regulation of synaptic transmission, cholinergic, and Locomotor rhythm network (Haplochromis burtoni)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	unc80	Unc-80 homolog (C. elegans). (3148 aa)
	LOC102290272	Uncharacterized protein. (399 aa)
	LOC102313546	Family with sequence similarity 155 member A. (385 aa)
	nalcn	Sodium leak channel, non-selective. (1710 aa)
	UNC79	Unc-79 homolog, NALCN channel complex subunit. (2428 aa)

Your Current Organism:

Haplochromis burtoni

NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC102290272	UNC79	ENSHBUP00000023014	ENSHBUP00000034370	Uncharacterized protein.	Unc-79 homolog, NALCN channel complex subunit.	0.997
LOC102290272	nalcn	ENSHBUP00000023014	ENSHBUP00000027981	Uncharacterized protein.	Sodium leak channel, non-selective.	0.960
LOC102290272	unc80	ENSHBUP00000023014	ENSHBUP00000003422	Uncharacterized protein.	Unc-80 homolog (C. elegans).	0.932
LOC102313546	UNC79	ENSHBUP00000024699	ENSHBUP00000034370	Family with sequence similarity 155 member A.	Unc-79 homolog, NALCN channel complex subunit.	0.997
LOC102313546	nalcn	ENSHBUP00000024699	ENSHBUP00000027981	Family with sequence similarity 155 member A.	Sodium leak channel, non-selective.	0.642
LOC102313546	unc80	ENSHBUP00000024699	ENSHBUP00000003422	Family with sequence similarity 155 member A.	Unc-80 homolog (C. elegans).	0.454
UNC79	LOC102290272	ENSHBUP00000034370	ENSHBUP00000023014	Unc-79 homolog, NALCN channel complex subunit.	Uncharacterized protein.	0.997
UNC79	LOC102313546	ENSHBUP00000034370	ENSHBUP00000024699	Unc-79 homolog, NALCN channel complex subunit.	Family with sequence similarity 155 member A.	0.997
UNC79	nalcn	ENSHBUP00000034370	ENSHBUP00000027981	Unc-79 homolog, NALCN channel complex subunit.	Sodium leak channel, non-selective.	0.999
UNC79	unc80	ENSHBUP00000034370	ENSHBUP00000003422	Unc-79 homolog, NALCN channel complex subunit.	Unc-80 homolog (C. elegans).	0.990
nalcn	LOC102290272	ENSHBUP00000027981	ENSHBUP00000023014	Sodium leak channel, non-selective.	Uncharacterized protein.	0.960
nalcn	LOC102313546	ENSHBUP00000027981	ENSHBUP00000024699	Sodium leak channel, non-selective.	Family with sequence similarity 155 member A.	0.642
nalcn	UNC79	ENSHBUP00000027981	ENSHBUP00000034370	Sodium leak channel, non-selective.	Unc-79 homolog, NALCN channel complex subunit.	0.999
nalcn	unc80	ENSHBUP00000027981	ENSHBUP00000003422	Sodium leak channel, non-selective.	Unc-80 homolog (C. elegans).	0.990
unc80	LOC102290272	ENSHBUP00000003422	ENSHBUP00000023014	Unc-80 homolog (C. elegans).	Uncharacterized protein.	0.932
unc80	LOC102313546	ENSHBUP00000003422	ENSHBUP00000024699	Unc-80 homolog (C. elegans).	Family with sequence similarity 155 member A.	0.454
unc80	UNC79	ENSHBUP00000003422	ENSHBUP00000034370	Unc-80 homolog (C. elegans).	Unc-79 homolog, NALCN channel complex subunit.	0.990
unc80	nalcn	ENSHBUP00000003422	ENSHBUP00000027981	Unc-80 homolog (C. elegans).	Sodium leak channel, non-selective.	0.990