STRINGSTRING
mcm9 mcm9 ENSHBUP00000000679 ENSHBUP00000000679 fan1 fan1 tp53bp1 tp53bp1 ENSHBUP00000001804 ENSHBUP00000001804 SMARCAL1 SMARCAL1 rfc1 rfc1 rmi2 rmi2 brca1 brca1 ENSHBUP00000004241 ENSHBUP00000004241 xrcc3 xrcc3 brip1 brip1 ENSHBUP00000005048 ENSHBUP00000005048 ENSHBUP00000005062 ENSHBUP00000005062 rfc3 rfc3 cdc6 cdc6 tdrd3 tdrd3 fancm fancm prim2 prim2 lig1 lig1 ankrd12 ankrd12 pold3 pold3 PIEZO2 PIEZO2 pole2 pole2 gins1 gins1 orc4 orc4 RPA1 RPA1 primpol primpol LOC102297270 LOC102297270 pole4 pole4 ENSHBUP00000008246 ENSHBUP00000008246 ENSHBUP00000008317 ENSHBUP00000008317 rmi1 rmi1 slf1 slf1 orc5 orc5 ENSHBUP00000009123 ENSHBUP00000009123 ENSHBUP00000009143 ENSHBUP00000009143 rfc5 rfc5 pold2 pold2 mlh1 mlh1 rhno1 rhno1 mcmbp mcmbp mcm3 mcm3 mcm6 mcm6 pola2 pola2 ENSHBUP00000010473 ENSHBUP00000010473 dscc1 dscc1 gins4 gins4 LOC102298027 LOC102298027 bivm bivm cdc45 cdc45 rfc2 rfc2 LRR1 LRR1 gen1 gen1 atr atr LOC102312405 LOC102312405 topbp1 topbp1 LOC102311559 LOC102311559 blm blm top3a top3a mlh3 mlh3 MCMDC2 MCMDC2 pold1 pold1 cdca7 cdca7 exd2 exd2 chek2 chek2 meiob meiob gins3 gins3 pms2 pms2 orc3 orc3 mcph1 mcph1 stn1 stn1 rad9b rad9b CLSPN CLSPN LOC102305750 LOC102305750 brca2 brca2 rfc4 rfc4 ten1 ten1 rad50 rad50 rfwd3 rfwd3 hus1 hus1 LOC102292166 LOC102292166 timeless timeless nbn nbn LOC102308989 LOC102308989 LOC102291787 LOC102291787 mcm7 mcm7 cdc7 cdc7 rad51 rad51 mcm4 mcm4 pole pole rpa2 rpa2 xrcc2 xrcc2 rad9a rad9a ENSHBUP00000027756 ENSHBUP00000027756 ENSHBUP00000027773 ENSHBUP00000027773 tp73 tp73 prim1 prim1 fen1 fen1 wdhd1 wdhd1 chtf8 chtf8 atrip atrip rad51d rad51d mcm2 mcm2 pcna pcna exo1 exo1 rpa3 rpa3 zranb3 zranb3 msh5 msh5 rbbp8 rbbp8 gins2 gins2 fbh1 fbh1 mcm10 mcm10 mcm8 mcm8 piezo1 piezo1 cdt1 cdt1 rpa1 rpa1 dna2 dna2 rad1 rad1 mre11 mre11 recql4 recql4 chtf18 chtf18 msh4 msh4 cdca7l cdca7l LOC102306769 LOC102306769 orc1 orc1 LOC102297614 LOC102297614 ENSHBUP00000033958 ENSHBUP00000033958 rad17 rad17 mcm5 mcm5 pola1 pola1 ENSHBUP00000034351 ENSHBUP00000034351 LOC102303847 LOC102303847 pms1 pms1 orc2 orc2 msh2 msh2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
mcm9Minichromosome maintenance 9 homologous recombination repair factor; Belongs to the MCM family. (1169 aa)
ENSHBUP00000000679MutS_I domain-containing protein. (166 aa)
fan1Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. (1106 aa)
tp53bp1Tumor protein p53 binding protein, 1. (1710 aa)
ENSHBUP00000001804RFC1 domain-containing protein. (135 aa)
SMARCAL1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1; Belongs to the SNF2/RAD54 helicase family. SMARCAL1 subfamily. (899 aa)
rfc1BRCT domain-containing protein. (471 aa)
rmi2RecQ mediated genome instability 2. (146 aa)
brca1Uncharacterized protein. (1388 aa)
ENSHBUP00000004241Polymerase (DNA directed), epsilon 3 (p17 subunit). (147 aa)
xrcc3DNA repair protein; Involved in the homologous recombination repair (HRR) pathway of double-stranded DNA, thought to repair chromosomal fragmentation, translocations and deletions; Belongs to the RecA family. RAD51 subfamily. (336 aa)
brip1BRCA1 interacting protein C-terminal helicase 1. (1221 aa)
ENSHBUP00000005048TAN domain-containing protein. (177 aa)
ENSHBUP00000005062Uncharacterized protein. (143 aa)
rfc3Replication factor C (activator 1) 3. (356 aa)
cdc6Cell division cycle 6 homolog (S. cerevisiae). (429 aa)
tdrd3Tudor domain containing 3. (780 aa)
fancmUncharacterized protein. (2114 aa)
prim2DNA primase large subunit; Regulatory subunit of the DNA primase complex and component of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which play an essential role in the initiation of DNA synthesis. The primase subunit of the polymerase alpha complex initiates DNA synthesis by oligomerising short RNA primers on both leading and lagging strands. (513 aa)
lig1DNA ligase. (1012 aa)
ankrd12Ankyrin repeat domain 12. (1951 aa)
pold3Polymerase (DNA-directed), delta 3, accessory subunit. (444 aa)
PIEZO2Piezo-type mechanosensitive ion channel component. (2980 aa)
pole2DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (532 aa)
gins1GINS complex subunit 1 (Psf1 homolog). (212 aa)
orc4Origin recognition complex subunit 4; Component of the origin recognition complex (ORC) that binds origins of replication; Belongs to the ORC4 family. (498 aa)
RPA1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (557 aa)
primpolPrimase and polymerase (DNA-directed). (521 aa)
LOC102297270SCY domain-containing protein. (125 aa)
pole4Polymerase (DNA-directed), epsilon 4, accessory subunit. (129 aa)
ENSHBUP00000008246Uncharacterized protein. (117 aa)
ENSHBUP00000008317DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1192 aa)
rmi1RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae). (679 aa)
slf1SMC5-SMC6 complex localization factor 1. (885 aa)
orc5Origin recognition complex, subunit 5. (450 aa)
ENSHBUP00000009123Uncharacterized protein. (264 aa)
ENSHBUP00000009143AAA_23 domain-containing protein. (92 aa)
rfc5Replication factor C (activator 1) 5. (335 aa)
pold2Polymerase (DNA directed), delta 2, regulatory subunit. (481 aa)
mlh1MutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli). (758 aa)
rhno1Si:ch73-352p4.5. (295 aa)
mcmbpMinichromosome maintenance complex binding protein. (632 aa)
mcm3DNA helicase; Belongs to the MCM family. (811 aa)
mcm6DNA helicase; Belongs to the MCM family. (828 aa)
pola2DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. (602 aa)
ENSHBUP00000010473BRCT domain-containing protein. (179 aa)
dscc1DNA replication and sister chromatid cohesion 1. (390 aa)
gins4DNA replication complex GINS protein SLD5; The GINS complex plays an essential role in the initiation of DNA replication; Belongs to the GINS4/SLD5 family. (224 aa)
LOC102298027DBF4 zinc finger. (433 aa)
bivmBasic, immunoglobulin-like variable motif containing. (496 aa)
cdc45CDC45 cell division cycle 45 homolog (S. cerevisiae). (568 aa)
rfc2Replication factor C (activator 1) 2. (356 aa)
LRR1Leucine rich repeat protein 1. (421 aa)
gen1Uncharacterized protein. (887 aa)
atrATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. (3139 aa)
LOC102312405ATPase family AAA domain containing 5a. (1808 aa)
topbp1DNA topoisomerase II binding protein 1. (1538 aa)
LOC102311559WD_REPEATS_REGION domain-containing protein. (318 aa)
blmBLM RecQ like helicase. (1405 aa)
top3aDNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (1037 aa)
mlh3MutL homolog 3 (E. coli). (1142 aa)
MCMDC2Minichromosome maintenance domain containing 2. (678 aa)
pold1DNA polymerase. (1129 aa)
cdca7Cell division cycle associated 7a. (401 aa)
exd2Exonuclease 3'-5' domain containing 2. (635 aa)
chek2Checkpoint kinase 2. (521 aa)
meiobMethionine sulfoxide reductase B1b. (464 aa)
gins3GINS complex subunit 3. (211 aa)
pms2PMS1 homolog 2, mismatch repair system component. (861 aa)
orc3Origin recognition complex, subunit 3. (720 aa)
mcph1Microcephalin 1. (771 aa)
stn1CST complex subunit STN1; Component of the CST complex proposed to act as a specialized replication factor promoting DNA replication under conditions of replication stress or natural replication barriers such as the telomere duplex. The CST complex binds single-stranded DNA with high affinity in a sequence-independent manner, while isolated subunits bind DNA with low affinity by themselves. Initially the CST complex has been proposed to protect telomeres from DNA degradation. However, the CST complex has been shown to be involved in several aspects of telomere replication. (365 aa)
rad9bRAD9 checkpoint clamp component B. (390 aa)
CLSPNClaspin. (1353 aa)
LOC102305750MutS homolog 3 (E. coli); Component of the post-replicative DNA mismatch repair system (MMR). (911 aa)
brca2BRCA2 DNA repair associated. (3303 aa)
rfc4Replication factor C (activator 1) 4. (357 aa)
ten1TEN1 subunit of CST complex. (130 aa)
rad50RAD50 homolog, double strand break repair protein. (1312 aa)
rfwd3Ring finger and WD repeat domain 3. (708 aa)
hus1Checkpoint protein; Belongs to the HUS1 family. (285 aa)
LOC102292166DBF4-type domain-containing protein. (867 aa)
timelessTimeless circadian clock. (1249 aa)
nbnNibrin. (779 aa)
LOC102308989ANK_REP_REGION domain-containing protein. (698 aa)
LOC102291787Zgc:110269. (388 aa)
mcm7DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] (740 aa)
cdc7Cell division cycle 7 homolog (S. cerevisiae). (611 aa)
rad51DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...] (336 aa)
mcm4DNA helicase; Belongs to the MCM family. (860 aa)
poleDNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2016 aa)
rpa2Replication protein A2. (293 aa)
xrcc2X-ray repair cross complementing 2. (324 aa)
rad9aCell cycle checkpoint control protein; Belongs to the rad9 family. (389 aa)
ENSHBUP00000027756Uncharacterized protein. (561 aa)
ENSHBUP00000027773Uncharacterized protein. (302 aa)
tp73Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. (644 aa)
prim1DNA primase; Belongs to the eukaryotic-type primase small subunit family. (426 aa)
fen1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (380 aa)
wdhd1WD repeat and HMG-box DNA binding protein 1. (686 aa)
chtf8CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae). (136 aa)
atripUncharacterized protein. (789 aa)
rad51dRAD51 paralog D. (333 aa)
mcm2DNA helicase; Belongs to the MCM family. (886 aa)
pcnaProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
exo1Exonuclease 1. (737 aa)
rpa3Replication protein A3. (122 aa)
zranb3Zinc finger, RAN-binding domain containing 3. (1156 aa)
msh5MutS homolog 5. (816 aa)
rbbp8Uncharacterized protein. (673 aa)
gins2DNA replication complex GINS protein PSF2; Belongs to the GINS2/PSF2 family. (175 aa)
fbh1F-box DNA helicase 1. (1076 aa)
mcm10Minichromosome maintenance 10 replication initiation factor. (867 aa)
mcm8Minichromosome maintenance 8 homologous recombination repair factor; Belongs to the MCM family. (844 aa)
piezo1Piezo-type mechanosensitive ion channel component. (2306 aa)
cdt1Chromatin licensing and DNA replication factor 1. (607 aa)
rpa1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (602 aa)
dna2DNA replication helicase/nuclease 2. (1401 aa)
rad1RAD1 homolog (S. pombe). (309 aa)
mre11Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (695 aa)
recql4RecQ helicase-like 4. (1577 aa)
chtf18AAA domain-containing protein. (922 aa)
msh4DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (908 aa)
cdca7lCell division cycle associated 7b. (402 aa)
LOC102306769ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (817 aa)
orc1Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. (898 aa)
LOC102297614RAD51 paralog C. (359 aa)
ENSHBUP00000033958TIMELESS-interacting protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family. (229 aa)
rad17RAD17 checkpoint clamp loader component. (692 aa)
mcm5DNA helicase; Belongs to the MCM family. (767 aa)
pola1DNA polymerase. (1482 aa)
ENSHBUP00000034351DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (138 aa)
LOC102303847Uncharacterized protein. (251 aa)
pms1PMS1 homolog 1, mismatch repair system component. (897 aa)
orc2Origin recognition complex, subunit 2. (604 aa)
msh2DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1001 aa)
Your Current Organism:
Haplochromis burtoni
NCBI taxonomy Id: 8153
Other names: Astatotilapia burtoni, Chromis burtoni, H. burtoni
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